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. 2022 Jun 6;10:49ā€“56. doi: 10.7150/jgen.74788

Table 3.

Number of secondary metabolites clusters (antiSMASH) of Frankia strains Ag45/Mut15 and AgPM24 compared to those of cultivated type strains of Frankia species in clusters 1 to 4

Strain Cluster 1 Cluster 2 Cluster 3 Cluster 4
ACN14aT ARgP5T CpI1T QA3 Ag45/Mut15 AgPM24 CcI3T BMG5.1T BCU110501T BMG5.12T G2T CjT EAN1pec EUN1f M16386T EuI1cT Cn3T DC12
species alni canadensis torreyi casuarinae coriariae discariae elaeagni irregularis soli asymbiotica inefficax saprophytica
t1PKS1 6 9 8 8 9 11 1 6 16 13 6 9 5 9 6 5 2 1
t2PKS 1 3 1 3 1 1 2 2 1 1 2 1 1 2 1 2 1 1
t3PKS 1 1 1 1 1 1 0 2 0 1 1 1 1 1 3 1 1 2
otherKS 4 4 3 3 3 5 4 1 4 3 6 4 4 6 2 1 2 1
t1pks-NRPS 1 0 1 0 1 2 1 0 1 0 0 0 1 1 0 0 0 0
NRPS 3 6 2 2 6 6 0 1 1 2 9 5 3 5 4 2 7 1
terpene 5 3 5 5 4 4 4 3 4 4 3 5 4 4 5 4 4 3
lanthipeptide 1 1 1 3 0 3 6 2 4 3 2 1 4 3 1 2 1 2
bacteriocin 2 1 2 2 1 2 1 1 2 2 2 2 3 0 3 1 2 0
siderophore 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 0 0 0
lassopeptide 1 1 1 2 1 1 0 1 0 0 1 0 0 0 1 2 1 2
betalactone 0 0 0 0 0 0 0 0 0 0 2 0 0 0 1 2 0 1
thiopeptide 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 0
butyrolactone 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
phosphonate 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
arylpolyene 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0
nucleoside 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0
ladderane 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0
oligosaccharide 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
resorcinol 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0
LAP 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0
other 0 2 2 3 1 0 4 1 1 5 1 1 0 1 2 1 5 1
Total/strain 27 33 28 33 29 38 26 22 36 35 37 30 27 33 29 23 28 15

1-tnPKS is type ā€œnā€ PolyKetide Synthase, NRPS is Non Ribosomal Peptide Synthase, LAP is Linear Azole/azoline-containing Peptide.