AUC |
area under the curve |
C1orf106 |
chromosome 1 open reading frame 106 |
CADM |
clinically amyopathic dermatomyositis |
CB2R |
cannabinoid type 2 receptor |
ceRNA |
competing endogenous RNA |
CHD3 |
chromodomain- helicase- DNA- binding protein 3 |
CIBERSORT |
cell type identification by estimating relative subsets of RNA transcripts |
COG8 |
component of oligomeric Golgi complex 8 |
Cor |
correlation coefficient |
CTLA-4 |
cytotoxic T-lymphocyte–associated protein 4 |
CXCR4 |
C-X-C motif chemokine receptor 4 |
DM |
dermatomyositis |
EVPL |
envoplakin |
ES |
enrichment score |
FDR |
false-positive rate |
GC |
germinal center |
GEO |
Gene Expression Omnibus |
GIMAPs |
GTPases of immunity-associated proteins |
GIMAP6 |
GTPases of immunity-associated protein family member 6 |
GO |
Gene Ontology |
GPL |
GEO platforms |
GSEA |
Gene S e t Enrichment An a l y s i s |
HIV-1 |
human immunodeficiency virus 1 |
IBD |
inflammatory bowel disease |
IFI6 |
interferon-alpha inducible protein 6 |
IFIH1 |
interferon induced with helicase C domain 1 |
IFN |
interferon |
IFN-I |
type I interferon |
IL |
interleukin |
ILD |
interstitial lung disease |
IIMILD |
idiopathic inflammatory myopathy–related ILD |
INAVA |
innate immunity activator |
ISG |
interferon-stimulated gene |
ISG15 |
interferon-stimulated gene 15 |
JAK/STAT |
Janus kinase/signal transducers and activators of transcription |
JDM |
juvenile dermatomyositis |
KEGG |
Kyoto Encyclopedia of Genes and Genomes |
KIRC |
kidney renal clear cell carcinoma |
LASSO |
least absolute shrinkage and selection operator |
lncRNA |
long noncoding RNA |
MAAs |
myositis-associated autoantibodies |
MSAs |
myositis-specific autoantibodies |
MAD5 |
melanoma differentiation–associated gene 5 |
ME |
module eigengene |
MFI |
mean fluorescence intensity |
MHC-II |
major histocompatibility complex class II |
mRNA |
messenger RNA |
miRNA |
microRNA |
MIR21 |
microRNA 21 |
MM |
module membership |
MS |
multiple sclerosis |
NES |
normalized enrichment score |
PBMCs |
peripheral blood mononuclear cells |
RIG-I |
retinoic acid inducible-gene I |
ROC curve |
receiver operating characteristic curve |
PRR |
pattern recognition receptors |
RP-ILD |
rapidly progressive interstitial lung disease |
SLE |
systemic lupus erythematosus |
SNPs |
single nucleotide polymorphisms |
TFs |
transcription factors |
Th |
T helper |
TOM |
topological overlap matrix |
TRIM33 |
tripartitemotif-containing 33 |
WGCNA |
weighted gene coexpression network analysis |