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. 2022 Jun 9;19(1):781–810. doi: 10.1080/15476286.2022.2079890

Table 1.

RNA helicases in ribosome biogenesis and their presumed functions

Name Type Maturation step Cofactors Known or hypothesized function in RNA folding/unwinding
Fal1 DEAD 90S Sgd1 unknown
Dbp8 DEAD 90S Esf2 unknown
Dbp4/Hca4 DEAD 90S unknown 18S rRNA 5’ domain folding; U14 release
Rrp3 DEAD 90S unknown unknown
Rok1 DEAD 90S Rrp5 snR30 release from 90S particles; Rrp5 release from 90S particles
Dhr2 DEAH 90S, (early pre-40S) unknown unknown
Dhr1/Ecm16 DEAH 90S, early pre-40S Utp14 promotion of A1 cleavage; release of the U3 snoRNA from the 18S rRNA, which triggers formation of the central pseudoknot
Prp43 DEAH 90S, pre-40S, pre-60S Pfa1, Pxr1 (G-patch) snoRNA (snR72, snR60, others) release; 18S rRNA H44 restructuring
Has1 DEAD 90S, early to late nucleolar pre-60S unknown U14 release; Rrp36 release; contact formation between 25S rRNA domain I and 5.8S rRNA
Mtr4 Ski2-like 90S, nucleoplasmic pre-60S unknown 5’ETS and ITS2 unwinding and recruitment of the nuclear exosome for 3’-5’ degradation of these spacer elements
Dbp6 DEAD (90S), early nucleolar pre-60S unknown unknown
Dbp7 DExD (90S), early nucleolar pre-60S unknown snR190 (possibly also snR34) release
Dbp9 DEAD early nucleolar pre-60S unknown unknown
Dbp3 DEAD early nucleolar pre-60S unknown snoRNA release; ITS1 re-arrangement
Drs1 DEAD early/intermediate nucleolar pre-60S unknown promotion of A2 cleavage; stable Nop7Erb1Ytm1 incorporation
Mak5 DEAD early/intermediate nucleolar pre-60S unknown 25S rRNA H39 restructuring
Dbp2 DEAD early/intermediate nucleolar pre-60S unknown U8 snoRNA release in higher eukaryotes; re-arrangement of ITS2 hairpin in yeast; both are proposed to regulate formation of the proximal 25S(28S)/5.8S stem
Dbp10 DEAD intermediate nucleolar pre-60S unknown 25S rRNA H89-H92 (PTC) folding
Spb4 DEAD late nucleolar pre-60S unknown 25S rRNA H62/H63 restructuring