Table 2.
Primers and references for specific protocols for amplification of the four DNA fragments sequenced in the study.
| DNA fragment | Primer name | Primer direction | Primer sequence (5′-3′) | Primer source | PCR programme |
|---|---|---|---|---|---|
| 18S rRNA | 18S_Tar_Ff1 | Forward | AGGCGAAACCGCGAATGGCTC | 39 | 40 |
| 18S_Tar_Rr1 | Reverse | GCCGCAGGCTCCACTCCTGG | |||
| 28S rRNA | 28S_Eutar_F | Forward | ACCCGCTGAACTTAAGCATAT | 41 | 42 |
| 28SR0990 | Reverse | CCTTGGTCCGTGTTTCAAGAC | 42 | ||
| ITS-2 | ITS2_Eutar_Ff | Forward | GCATCGATGAAGAACGCAGC | 43 | 43 |
| ITS2_Eutar_Rr | Reverse | TCCTCCGCTTATTGATATGC | |||
| COI | LCO1490 | Forward | GGTCAACAAATCATAAAGATATTGG | 44 | 11 |
| HCOoutout | Reverse | GTAAATATATGRTGDGCTC | 45 |