Table 6.
Correlation among line B proportions estimated with different methodsa for the broiler data
Method | LR | ADMIXTURE | REL_GP | REL_GP_noF |
---|---|---|---|---|
BOA | 0.917 | 0.927 | 0.861 | 0.902 |
LR | 1 | 0.975 | 0.843 | 0.890 |
ADMIXTURE | 0.975 | 1 | 0.864 | 0.911 |
REL_GP | 0.843 | 0.864 | 1 | 0.970 |
REL_GP_noF | 0.890 | 0.911 | 0.970 | 1 |
aLine B proportions are estimated from estimated breed-origin-of-alleles (BOA), using linear regression on mean allele counts within line (LR), ADMIXTURE analysis, the genomic relationship with maternal grandsire (REL_GP), or this relationship after adjusting all self-relationships to 1 (REL_GP_noF)