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. Author manuscript; available in PMC: 2022 Jun 15.
Published in final edited form as: FASEB J. 2020 Mar 26;34(5):6129–6146. doi: 10.1096/fj.201902982R

Table 1.

Vasopressin responsive phosphorylation sites in PKA-null cells

Accession Gene Symbol Site(s) Protein Name Centralized Sequence Median Log2(dDAVP/ Vehicle) −log10 (Pfp)

P59729 Rin3 S411 Ras and Rab interactor 3 GISRTAS*LNLPPQ 0.86 3.52
Q8R4H2 Arhgef12 S41 Rho guanine nucleotide exchange factor 12 KVERSSS*HDFDPT 0.79 3.28
Q8C1B1 Camsap2 S439 Calmodulin-regulated spectrin-associated protein 2 GIIRSVS*NEGLTL 0.75 3.16
Q9Z1E4 Gys1 S711 Glycogen [starch] synthase, muscle GSKRSNS*VDTGPS 0.70 2.98
P45481 Crebbp S120 CREB-binding protein LGAMGKS*PLNQGD 0.59 2.63
Q9D279 Misp S364 Mitotic interactor and substrate of PLK1 GLQRSLS*SDCILS 0.59 2.67
Q9ERG2 Strn3 S202 Striatin-3 RSQRVRS*LLGLSN 0.58 2.95
Q3UHI0 Ccser2 S222 Serine-rich coiled-coil domain-containing protein 2 KMVRSQS*FSHSIQ 0.58 2.66
P19001 Krt19 S59 Keratin, type I cytoskeletal 19 VTSSSGS*YGGVRG 0.52 2.47
Q68ED7 Crtc1 S151 CREB-regulated transcription coactivator 1 SWRRTNS*DSALHQ 0.49 2.24
Q3TWF6 Wdr70 S641 WD repeat-containing protein 70 MFAQVES*DDEESK 0.49 2.75
A6H8H2 Dennd4c S1321 DENN domain-containing protein 4C YKDRSTS*LSALVR 0.48 1.98
Q9CY58 Serbp1 S203 Plasminogen activator inhibitor 1 RNA-binding protein SGSDRSS*FSHYSG 0.48 2.18
Q8BG32 Psmd11 S14 26S proteasome non-ATPase regulatory subunit 11 EFQRAQS*LLSTDR 0.48 1.97
Q3B7Z2 Osbp S377 Oxysterol-binding protein 1 GHKRTGS*NISGAS 0.39 2.48
Q60875 Arhgef2 S163 Rho guanine nucleotide exchange factor 2 GHFNDES*PLGLRQ 0.39 2.11
Q60875 Arhgef2 S151 Rho guanine nucleotide exchange factor 2 SLAKSVS*TTNIAG 0.39 2.31
Q9ESE1 Lrba T1011 Lipopolysaccharide-responsive and beige-like anchor protein SNTELQT*HDMSSD 0.37 2.44
Q6GYP7 Ralgapa1 S772 RalGTPase-activating protein subunit alpha-1 TRVRHFS*QSEDTG 0.33 2.62
Q9ESE1 Lrba S1000 Lipopolysaccharide-responsive and beige-like anchor protein SIGRASS*IDSASN 0.30 2.75
Q9Z1W9 Stk39 S383 STE20/SPS1-related proline-alanine-rich protein kinase RRVPGSS*GHLHKT 0.29 2.60
P54310 Lipe S559 Hormone-sensitive lipase SMRRSVS*EAALAQ 0.25 3.34
P99027 Rplp2 S79 60S acidic ribosomal protein P2 VSAAPGS*AAPAAG −0.18 1.33
Q8BTM8 Flna S968 Filamin-A SVGVSPS*LDLSKI −0.20 2.98
Q9JKB3 Ybx3 S52 Y-box-binding protein 3 AALLAGS*PGGDAA −0.20 2.75
Q62074 Prkci T411 Protein kinase C iota type PGDTTST*FCGTPN −0.34 2.39
Q62074 Prkci T415 Protein kinase C iota type TSTFCGT*PNYIAP −0.35 2.32
Q9D1C9 Rrp7a S99 Ribosomal RNA-processing protein 7 homolog A KPDLAES*PTEPKS −0.35 2.12
Q8C0T5 Sipa1l1 S1626 Signal-induced proliferation-associated 1-like protein 1 HGEFSAS*DSSLTD −0.45 1.99
Q9Z2H5 Epb41l1 S378 Band 4.1-like protein 1 TFFRLVS*PEPPPK −0.45 2.39
P99027 Rplp2 S86 60S acidic ribosomal protein P2 AAPAAGS*APAAAE −0.59 3.65
P39447 Tjp1 S280 Tight junction protein ZO-1 LSDSIHS*ANASER −0.65 2.25
Q3UHX2 Pdap1 S60 28 kDa heat- and acid-stable phosphoprotein EKKSLDS*DESEDE −0.83 1.25
P11276 Fn1 S285 Fibronectin ASAGSGS*FTDVRT −0.84 3.67
Q99J36 Thumpd1 S88 THUMP domain-containing protein 1 DQQPSGS*EGEDDD −0.94 4.60
P09405 Ncl S145 Nucleolin NAKKEDS*DEDEDE −1.64 16.00
Q3THK3 Gtf2f1 S311 General transcription factor IIF subunit 1 SESSEES*EEEKPP −2.46 15.60

These sites have redundant quantification evidence showing similar changes (e.g. PKA-null and PKA-intact cells, site containing peptides with or without missed cleavage, and HCD-EThcD pairs). The MS1 spectra of monophosphopeptides containing these sites can be found in Supplemental Figure 3. Eleven of the increased phosphorylation sites are putative SNF1-subfamily targets based on the presence of an (R/K)-(T/S)-X-p(S/T) motif with nonpolar amino acid in position −5 and/or position +4 relative to the phosphorylated amino acid (underlined amino acids).