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. 2022 Jun 2;13:904392. doi: 10.3389/fpls.2022.904392

Table 5.

Differentially Expressed Transcripts (DETs) and primers used for qPCR.

Sr. No. Transcript ID Primer Pair Primer Sequence Tm (°C) GC % Amplicon Size (bp)
1 TRINITY_DN521405_c2_g2_i1 (Avenin-like a4) SP-QF33 TGCCCTTGCTGCTGTCGCATGA 55.44 59.09 137
SP-QR33 ACAGATGTGGCAGGCAAGCGGT 57.08 58.33
2 TRINITY_DN483169_c0_g1_i6 (Alpha-amylase inhibitor 0.19) SP-QF24 AGCCGAGTACGACGCATGGAGCGTT 58.21 60.00 119
SP-QR24 TGCCATTGCACTGGAGCCTCAGCA 57.21 58.33
3 TRINITY_DN518599_c1_g1_i2 (Aspartic proteinase oryzasin-1) SP-QF31 TTAAGCTAGCCCGCTTGTGCCA 52.72 54.55 114
SP-QR31 ACGGCAAACTAGCGAATCCTGCGT 55.07 54.17
4 TRINITY_DN326896_c0_g1_i1 (Elongation factor 1-alpha) SP-QF10 TGAAGGAGCCCTTTCCCATCTCAGCA 55.92 53.85 122
SP-QR10 ACACGTAGATTCGGGCAAGTCCACCA 56.02 53.85
5 TRINITY_DN385005_c2_g1_i2 (Zinc transporter 6) SP-QF12 GTCCCTGCTGTCAGGTGGAGGAATAA 54.07 53.85 125
SP-QR12 ACGACCGACATGCATCTGAAGTGGA 54.23 52.00
6 TRINITY_DN425597_c0_g2_i2 (heat shock protein 83-like) SP-QF15 AAGCCAGAAGACAGGAGCGCAGTT 54.72 54.17 148
SP-QR15 ACATGGCAGCAAAGAAACACCTGGAG 54.01 50.00
7 TRINITY_DN490415_c0_g1_i8 (Alpha-gliadin) SP-QF25 ATTTCCGCGAACTGGGGCAGTTGT 55.47 54.17 119
SP-QR25 TCCTTCCAACAGCCTCAGCAGCAA 54.81 54.17
8 TRINITY_DN365152_c1_g1_i1 (Curcuminoid synthase) SP-QF11 ACGCATTCCGTAGCGCCATTGT 53.39 54.55 143
SP-QR11 TATATTGTCCAGGATCGGACGCCCT 53.19 52.00
9 TRINITY_DN472370_c0_g2_i1 (Uncharacterized protein) SP-QF21 AGAGGCCTTGGGGTTGAAACAACCTT 55.02 50.00 146
SP-QR21 TTCATCCCGCATCGCCAGTTCTGCTT 56.99 53.85
10 TRINITY_DN441674_c0_g2_i1 (Putative uncharacterized protein) SP-QF17 GTTTGTTTTACGGCGTAGCCTCCCGA 55.24 53.85 143
SP-QR17 ACTCAAGCCTCGCTTGGTATTGGGCA 56.65 53.85

GC content of the primers was ranged from 50.00 to 60.00% and the size of amplicon was observed to be ranged from 114 to 148.