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. 2022 Jun 2;13:913624. doi: 10.3389/fmicb.2022.913624

Figure 2.

Figure 2

Distribution of GH95 α-l-fucosidase homologs in the fecal metagenome of each participant before fermentation. Target proteins were AfcA in Bifidobacterium bifidum JCM 1254, Afc3 in Clostridium perfringens ATCC 13124T, RUMGNA_00842 in [Ruminococcus] gnavus ATCC 29149T, XAC1774 in Xanthomonas citri pv. citri str. 306, Blon_2335 in Bifidobacterium longum subsp. infantis ATCC 15697T, CjAfc95A in Cellvibrio japonicus Ueda107, RiFuc95 in Roseburia inulinivorans DSM 16841T, and SpGH95 in Streptococcus pneumoniae TIGR4. The heatmap shows counts of mapped reads to target proteins per million reads. Extracellular α-l-fucosidases were predicted using TMHMM-2.0 and SignalP-5.0. *the ratio of reads mapped to the extracellular GH95 fucosidase to those mapped to the intracellular one.