Table 2.
Functional SNPs between resistant (Chikurin Ibaraki 1) and susceptible (Igri, Uschi and Golden Promise) lines originated from three candidate genes.
| Gene | SNP | Codon | Amino acid substitution | |||||
|---|---|---|---|---|---|---|---|---|
| Morex v3 | Igri | Golden Promise | Chikurin Ibaraki 1 | Igri | Uschi | Golden Promise | ||
| HORVU.MOREX.r3.6HG0573590.1 | Horvu_IGRI_6H01G211100.1 | Horvu_GOLDEN_6H01G188600.1 | G | T | T | T | GCA- > TCA | Ala(A)- > Ser(S) |
| HORVU.MOREX.r3.6HG0573600.1 | Horvu_IGRI_6H01G211200.1 | Horvu_GOLDEN_6H01G188700.1 | G | A | A | G | GAC- > AAC | Asp(D)- > Asn(N) |
| HORVU.MOREX.r3.6HG0573610.1 | Horvu_IGRI_6H01G211300.1 | Horvu_GOLDEN_6H01G188800.1 | A | G | G | G | TGA- > TGG | Ter(*)- > Trp(W) |