Table 3:

Performance of best regressors on top-10 genes from VCF and MAF files extracted using all techniques

Technique	File type	MAE	RMSE	R	P-value
MuTect2	VCF	12.52	19.58	0.57	7.00E-37
	MAF	16.47	22.16	0.37	1.31E-14
MuSE	VCF	13.88	20.38	0.51	1.38E-29
	MAF	16.89	22.48	0.34	1.68E-12
Varscan2	VCF	14.57	20.78	0.48	4.77E-26
	MAF	16.53	22.26	0.36	9.11E-14
SomaticSniper	VCF	15.76	21.82	0.40	3.31E-17
	MAF	16.72	22.26	0.33	8.46E-12