Table 1.

Testing datasets. We utilized datasets from the Affymetrix microarray platform (hgu133a and HTA array) and RNA-Seq data

ID	Dataset	n	TNBC	Platform
A	GSE106977	119	119	Affymetrix HTA 2.0
B	GSE25055	310	116	Affymetrix U133A Array
C	GSE26055	198	60	Affymetrix U133A Array
D	GSE32646	115	26	Affymetrix U133A Array
E	BrighTNess	482	482	RNASeq
F	CALGB 40603	389	241	RNASeq
G	BEAUTY	126a	42	RNASeq

^a Additional RNASeq samples were available, whereas the original manuscript reported samples having both RNASeq and DNASeq data.