Table 3. Molecular characterisation of poliovirus SL-3 isolates from airport sewage based on the VP1 sequences, Warsaw, Poland, July 2017–March 2020 (n = 8).
| SL-3 isolates | Nucleotide position on VP1 sequence with reference to the complete genome sequence of the reference Sabin 3 strain (AY184221) | Nucleotide substitutions | VP-1 sequence results | |||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 2493 | 2636 | 2665 | 2762 | 2806 | 2905 | 2975 | 2989 | 3028 | 3178 | 3184 | 3228 | 3248 | 3283 | 3305 | 3335 | 3338 | n | % | ||
| Sabin 3 | C | G | C | A | C | U | U | C | C | U | U | A | A | C | C | A | A | |||
| 31 Dec 2018 | U | - | - | - | T | C | - | - | - | - | - | - | - | - | - | - | - | 3 | 0.33 | SL |
| 15 Jan 2019 | U | A | - | - | - | - | - | - | - | - | - | G | G | - | - | - | - | 4 | 0.44 | SL |
| 22 Jan 2019 | U | A | - | - | - | - | - | - | U | - | - | G | G | - | U | G | - | 7 | 0.78 | preVDPV |
| 26 Mar 2019 (36 °C) | U | - | - | - | - | - | - | - | - | C | C | - | - | U | - | - | - | 4 | 0.44 | SL |
| 26 Mar 2019 (40 °C) | U | - | - | - | - | - | A | - | - | C | - | - | - | U | - | - | - | 4 | 0.44 | SL |
| 4 Jun 2019 | U | - | U | - | - | - | - | - | - | - | - | - | - | - | - | - | - | 2 | 0.22 | SL |
| 6 Aug2019 | U | - | - | - | - | - | - | - | - | - | - | - | G | - | - | - | - | 2 | 0.22 | SL |
| 14 Jan2020 | U | - | - | G | - | - | - | U | - | - | - | - | - | - | - | - | G | 4 | 0.44 | SL |
SL: Sabin-like.
Bold letters and grey shading: non-synonymous substitutions. Hyphens: identity with the reference Sabin 3 strain (AY184221).