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. 2022 Apr 5;135(6):2025–2039. doi: 10.1007/s00122-022-04091-2

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© The Author(s) 2022

Open AccessThis article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons licence, and indicate if changes were made. The images or other third party material in this article are included in the article's Creative Commons licence, unless indicated otherwise in a credit line to the material. If material is not included in the article's Creative Commons licence and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this licence, visit http://creativecommons.org/licenses/by/4.0/.

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Fig. 4 — Manhattan plots of nested association mapping (NAM) analysis for SCN population TN22 (HG type 1.2.5.7) plotted against positions on each of the 20 chromosomes. The NAM panel included pop1 (SA13-1385 × PI 90763), pop2 (LD11-2170 × PI 90763) and pop3 (SA10-8471 × PI 90763). The significant SNPs were distinguished by the false discovery rate (FDR) of the α ≤ 0.001 thresholds represented by the dotted line