Skip to main content
. 2021 Nov 9;12(2):jkab390. doi: 10.1093/g3journal/jkab390

Table 1.

Estimates of genetic diversity (π), minor allele frequency (MAF), Tajima’s D and linkage disequilibrium in the WC65 population used for constructing the Wheat PHG

Diversity statistic A genome B genome D genome
No. SNPs 430,050 504,260 523,011
MAF 0.116 0.122 0.050
π (per bp) 0.175 0.182 0.076
Tajima’s D –0.673 –0.552 –2.192
LDa (r2 ≤ 0.33) 12.2 Mb 9.8 Mb 20.0 Mb
a

Distance at which LD drops to half of its initial value (r2 ≤ 0.33).