Table 1.
Dataset 1 EYT 2013–2014
| Models and methods |
Models and methods |
||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| BRR | GBLUP | GK | PK | SK | BRR | GBLUP | GK | PK | SK | ||
|
|
|
||||||||||
| Env. | Scenario | Without G × E (WI) | With G × E (I) | ||||||||
| DTHD | |||||||||||
| Bed5IR | MT | 14.95 | 14.94 | 12.96 | 13.08 | 25.12 | 12.77 | 12.52 | 11.36 | 12.17 | 25.07 |
| EHT | MT | 31.32 | 31.30 | 29.51 | 29.86 | 42.57 | 27.77 | 27.19 | 23.17 | 24.43 | 42.62 |
| Flat5IR | MT | 8.68 | 8.59 | 8.61 | 8.62 | 9.36 | 5.97 | 5.92 | 6.49 | 7.26 | 7.85 |
| LHT | MT | 6.00 | 5.99 | 5.87 | 5.94 | 7.71 | 4.56 | 4.68 | 5.36 | 5.84 | 7.12 |
| Bed5IR | MT_P | 14.57 | 14.56 | 13.07 | 13.26 | 23.68 | 12.46 | 12.21 | 10.97 | 11.86 | 23.58 |
| EHT | MT_P | 26.06 | 26.09 | 24.63 | 24.98 | 34.09 | 24.50 | 23.75 | 20.45 | 20.89 | 34.58 |
| Flat5IR | MT_P | 9.12 | 9.09 | 9.09 | 9.18 | 9.96 | 6.25 | 6.29 | 6.75 | 7.62 | 8.45 |
| LHT | MT_P | 6.97 | 6.99 | 6.63 | 6.71 | 9.54 | 5.52 | 5.63 | 6.06 | 6.56 | 9.23 |
| DTMT | |||||||||||
| Bed5IR | MT | 11.62 | 11.58 | 10.17 | 10.18 | 18.88 | 10.25 | 9.94 | 9.07 | 9.37 | 18.93 |
| EHT | MT | 26.21 | 26.22 | 24.72 | 24.89 | 35.73 | 23.81 | 23.55 | 19.81 | 20.35 | 37.19 |
| Flat5IR | MT | 8.92 | 8.88 | 9.37 | 9.45 | 8.35 | 6.58 | 6.58 | 7.58 | 8.30 | 6.64 |
| LHT | MT | 7.80 | 7.77 | 7.58 | 7.62 | 10.83 | 6.52 | 6.45 | 6.44 | 6.93 | 10.77 |
| Bed5IR | MT_P | 11.47 | 11.49 | 10.34 | 10.43 | 17.96 | 10.21 | 9.91 | 8.99 | 9.40 | 18.05 |
| EHT | MT_P | 19.56 | 19.61 | 18.38 | 18.58 | 26.16 | 18.94 | 18.69 | 15.41 | 15.38 | 27.49 |
| Flat5IR | MT_P | 9.68 | 9.66 | 10.02 | 10.10 | 9.55 | 7.19 | 7.16 | 7.96 | 8.78 | 7.89 |
| LHT | MT_P | 8.42 | 8.42 | 8.00 | 8.11 | 11.83 | 7.24 | 7.20 | 7.30 | 7.69 | 12.13 |
Average mean squared error (MSE) of prediction for five multitrait multienvironment model-methods: BRR, Bayesian ridge regression; GBLUP, genomic best linear unbiased predictor; GK, Gaussian kernel; PK, polynomial kernel; SK, sigmoidal kernel without G × E (WI) and with G × E (I) for two scenarios (MT and MT_P) for four environments (Bed5IR, EHT, Flat5IR, LHT) and two traits (DTHD, days to heading and DTMT, days to maturity). Boldface indicates model-method with the lowest MSE for the environment.