Skip to main content
. 2021 Nov 25;12(2):jkab405. doi: 10.1093/g3journal/jkab405

Table 2.

Cross-validation model fit statistics for six scenarios

Scenario Training/prediction Prediction ability (SE) Slope (SE) Mean top 10%
(a) Height
 Random-CV 1558/413 0.58 (0.03) 0.73 (0.07) 0.38 (0.02)
 Fullsib-CV 2024/39 0.22 (0.18) 0.39 (0.35) 0.19 (0.19)
 4C 2063/451 0.29 0.39 0.29
 4C Full-Sib 2063/57 0.16 0.16 0.33
 4C Half-Sib 2063/29 0.23 (0.13) 0.23 (0.18) 0.17 (0.21)
 4C Unrelated 2063/186 0.24 0.56 0.25
(b) Stem form
 Random-CV 1558/413 0.78 (0.01) 0.81 (0.04) –0.37 (0.04)
 Fullsib-CV 2024/39 0.36 (0.16) 0.44 (0.22) –0.09 (0.33)
 4C 2063/451 0.57 0.71 –0.19
 4C Full-Sib 2063/57 0.37 0.17 –0.02
 4C Half-Sib 2063/29 0.29 (0.27) 0.26 (0.23) 0.07 (0.32)
 4C Unrelated 2063/186 0.04 0.07 –0.11

For replicated scenarios, standard errors are provided after each estimate. Random-CV, random approximately fivefold cross validation within the ACE training population with 10 reps; Fullsib-CV, each full-sib family is predicted using a training set lacking any members from that full-sib family, with 51 reps; 4C, 451 fourth cycle trees are predicted using the ACE training population; 4C Full-Sib, fourth cycle trees within one family having full-sib relatives in the ACE training population; 4C Half-Sib, fourth cycle trees within seven families having half-sib relatives in the ACE training population; 4C Unrelated, fourth cycle trees not having direct parental relationships with the ACE training population.