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. 2022 Jun 21;33(5):1609–1617. doi: 10.1007/s11224-022-01991-3

Table 1.

Structure-based virtual screening results of natural molecules from the ZINC database against the TMPRSS2 active site (top 10 hits)

Zinc ID Docking Score Glide energy Glide evdw Glide ecoul Glide emodel Residue interactions
H-bond Pi-Pi stacking Salt bridge
Nafamostat  −6.075  −25.636  −16.027  −9.609  −32.630 Asp180, Gly209 Asp180
ZINC000095912839  −8.654  −49.547  −38.614  −10.934  −64.129 Asp180, Gln183, Ser186, Gly209
ZINC000085597504  −8.538  −55.714  −42.66  −13.054  −77.883 Gly184, Gly207, Val218
ZINC000001507228  −8.454  −52.009  −38.316  −13.693  −72.394 Val25, His41, Gly184, Val218, Gly209
ZINC000095099473  −8.377  −33.502  −22.058  −11.444  −51.691 His41, Gly207, Val218
ZINC000059086766  −8.062  −51.482  −35.828  −15.654  −70.321 Val25, His41, Gly184, Gly209
ZINC000000526288  −7.864  −52.835  −44.701  −8.134  −70.813 Val25, Gly184, Gly209 His41
ZINC000069482080  −7.861  −37.677  −25.805  −11.872  −45.095 His41, Ser186, Gly209
ZINC000001532029  −7.853  −45.543  −35.285  −10.258  − 56.79 Gln183
ZINC000000077285  −7.696  −34.059  −26.096  −7.963  −42.861 Ser186 Asp180
ZINC000000038256  −7.666  −49.107  −38.728  −10.379  −62.49 Gly207, Lys87