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. Author manuscript; available in PMC: 2023 Feb 1.
Published in final edited form as: Nat Immunol. 2022 Jan 27;23(2):330–340. doi: 10.1038/s41590-021-01101-1

Fig. 7 ∣. In vivo 3PM of T cell migration in LPS-induced inflamed LNs.

Fig. 7 ∣

Schematics of imaging location (red box) in each LN; C, cortical side; M, medullary side in the LNs. 3D reconstruction of 650–700 μm z-stacks with the field of view of 300 × 300 μm2 acquired by 1,300 nm 3PE. Naive CD8+ T cells and naive CD4+ T cells were labeled with CMRA and CFSE, respectively in LN1–2. To exclude the possible effect of labeling on results, the labeling scheme was switched for LNs 3 and 4, with CMRA and CFSE labeling CD4+ and CD8+ T cells, respectively. Four LNs from four mice were imaged. Normalized T cell distributions by depth were acquired by measuring the number of cells within a volume (300 × 300 × 50 μm3) from the indicated depth to 50 μm below. T cell mean velocity and motility coefficient were measured within a volume (300 × 300 × 100 μm3) from the indicated depth to 100 μm below. Each data point indicates a tracked cell; the number of analyzed cells (n = 3–30) is indicated on the graphs; the median with the interquartile range; Kruskal–Wallis test followed by Dunn’s multiple comparisons test for differences between depths; two-tailed Mann-Whitney U-test for difference between CD8+ and CD4+ T cells.