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. 2022 Jun 21;4:41. doi: 10.1186/s42523-022-00192-x

Table 2.

Differentially abundant1 bacterial co-abundance groups (BCG)2 and ungrouped amplicon sequence variants (ASV) across transitions3

BCG W 4 Taxonomic lineage 5
BCG_76 264

p__Firmicutes; c__Clostridia; o__Lachnospirales; f__Lachnospiraceae

p__Firmicutes; c__Clostridia

BCG_85 272

p__Firmicutes; c__Clostridia; o__Christensenellales; f__Christensenellaceae; g__Christensenellaceae _R-7_group

p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Rikenellaceae; g__Rikenellaceae_RC9_gut_group; s__uncultured_Rikenella

ASV_85 277 p__Firmicutes; c__Bacilli

1Differential abundance was analyzed by Analysis of Composition of Microbes (ANCOM) in Qiime 2 (v.2020.8)

2The ASV were grouped into BCG using Sparce Cooccurrence Network Investigation for Compositional Data in Qiime 2 (v.2020.8)

3Transitions from cool-season to warm-season grass versus from warm-season to cool-season grass

4For ANCOM, H0(ij): mean(log[xi/xj) = mean(log[yi/yj). The W value indicates the number of times H0(ij) is rejected for the ith species

5Taxonomic assignment was conducted using the most recent SILVA database (SSU 138)