Table 3.
Differentially abundant1 bacterial co-abundance groups (BCG)2 and ungrouped amplicon sequence variants (ASV) across grazing systems3
| BCG | W 4 | Taxonomic lineage 5 |
|---|---|---|
| BCG_7 | 762 |
p__Firmicutes; c__Clostridia; o__Christensenellales; f__Christensenellaceae; g__Christensenellaceae _R-7_group; s__uncultured_Christensenella p__Spirochaetota; c__Spirochaetia; o__Spirochaetales; f__Spirochaetaceae; g__Treponema p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotellaceae_Ga6A1_group; s__unidentified_rumen p__Firmicutes; c__Clostridia; o__Christensenellales; f__Christensenellaceae; g__Christensenellaceae _R-7_group |
| BCG_21 | 752 |
p__Firmicutes; c__Clostridia; o__Oscillospirales; f__[Eubacterium]_coprostanoligenes_group; g__[Eubacterium]_coprostanoligenes_group p__Firmicutes; c__Clostridia; o__Oscillospirales; f__Oscillospiraceae; g__NK4A214_group; s__unidentified_rumen p__Firmicutes; c__Clostridia; o__Oscillospirales; f__UCG-010; g__UCG-010; s__uncultured_eubacterium |
| BCG_43 | 752 |
p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotellaceae_Ga6A1_group; s__unidentified_rumen p__Fibrobacterota; c__Fibrobacteria; o__Fibrobacterales; f__Fibrobacteraceae; g__Fibrobacter; s__bacterium_MB2022 p__Bacteroidota; c__Bacteroidia; o__Bacteroidales; f__Prevotellaceae; g__Prevotellaceae_Ga6A1_group; s__unidentified_rumen |
| BCG_82 | 756 |
p__Desulfobacterota; c__Desulfovibrionia; o__Desulfovibrionales; f__Desulfovibrionaceae; g__Desulfovibrio p__Actinobacteriota; c__Coriobacteriia; o__Coriobacteriales; f__Eggerthellaceae; g__Denitrobacterium; s__Denitrobacterium_detoxificans |
| BCG_91 | 701 |
p__Firmicutes; c__Clostridia; o__Oscillospirales; f__Oscillospiraceae; g__NK4A214_group p__Halobacterota; c__Methanomicrobia; o__Methanomicrobiales; f__Methanocorpusculaceae; g__Methanocorpusculum |
| BCG_104 | 701 |
p__Bacteroidota; c__Bacteroidia; o__Bacteroidales p__Bacteroidota; c__Bacteroidia |
| BCG_141 | 712 |
p__Firmicutes; c__Negativicutes; o__Acidaminococcales; f__Acidaminococcaceae; g__Phascolarctobacterium; s__wallaby_gut p__Firmicutes; c__Negativicutes; o__Acidaminococcales; f__Acidaminococcaceae; g__Phascolarctobacterium |
1Differential abundance was analyzed by Analysis of Composition of Microbes (ANCOM) in Qiime 2 (v.2020.8)
2The ASV were grouped into BCG using Sparce Cooccurrence Network Investigation for Compositional Data in Qiime 2 (v.2020.8)
3The bermudagrass integrated rotational grazing system versus the crabgrass integrated rotational grazing system
4For ANCOM, H0(ij): mean(log[xi/xj) = mean(log[yi/yj). The W value indicates the number of times H0(ij) is rejected for the ith species
5Taxonomic assignment was conducted using the most recent SILVA database (SSU 138)