TABLE 5.
Information about clusters with detectable sequence similarities to known Pfam adhesive domains
| Cluster no. | Avg. scorea | Cluster size (no. of sequences) | Domain overlapb | UniProtKBc | UniProt Reference Proteomesc | MGnifyc |
|---|---|---|---|---|---|---|
| 2 | 0.93 ± 0.06 | 8 | Big_8 (PF17961), Collagen_bind (PF05737) | 487d | 19d | 650d |
| 6 | 0.86 ± 0.05 | 6 | Collagen_bind (PF05737) | 276d | 66d | 1,174d |
| 8 | 0.84 ± 0.09 | 28 | TED (PF08341) | 1,149 | 222 | 48,395 |
| 15 | 0.78 ± 0.11 | 8 | LRR_4 (PF12799) | 45,022 | 2,793 | 170,274 |
| 17 | 0.78 ± 0.05 | 47 | TED (PF08341) | 1,170 | 170 | 54,096 |
| 19 | 0.77 ± 0.07 | 39 | TED (PF08341) | 954 | 148 | 28,283 |
| 21 | 0.74 ± 0.03 | 7 | TED (PF08341) | 56e | 16e | 3,617e |
| 24 | 0.71 ± 0.05 | 13 | TED (PF08341) | 1,223 | 214 | 53,312 |
Data shown are the average protein prediction score per cluster.
Similar Pfam adhesive domains found with Jackhmmer are indicated.
The numbers of homologous sequence hits per cluster in the UniProtKB, UniProt Reference Proteomes, and MGnify databases are shown.
C-terminal domain.
N-terminal domain.