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. 2022 May 24;204(6):e00107-22. doi: 10.1128/jb.00107-22

TABLE 5.

Information about clusters with detectable sequence similarities to known Pfam adhesive domains

Cluster no. Avg. scorea Cluster size (no. of sequences) Domain overlapb UniProtKBc UniProt Reference Proteomesc MGnifyc
2 0.93 ± 0.06 8 Big_8 (PF17961), Collagen_bind (PF05737) 487d 19d 650d
6 0.86 ± 0.05 6 Collagen_bind (PF05737) 276d 66d 1,174d
8 0.84 ± 0.09 28 TED (PF08341) 1,149 222 48,395
15 0.78 ± 0.11 8 LRR_4 (PF12799) 45,022 2,793 170,274
17 0.78 ± 0.05 47 TED (PF08341) 1,170 170 54,096
19 0.77 ± 0.07 39 TED (PF08341) 954 148 28,283
21 0.74 ± 0.03 7 TED (PF08341) 56e 16e 3,617e
24 0.71 ± 0.05 13 TED (PF08341) 1,223 214 53,312
a

Data shown are the average protein prediction score per cluster.

b

Similar Pfam adhesive domains found with Jackhmmer are indicated.

c

The numbers of homologous sequence hits per cluster in the UniProtKB, UniProt Reference Proteomes, and MGnify databases are shown.

d

C-terminal domain.

e

N-terminal domain.