Table 4.
Statistics summary comparing regions displaying extreme genetic differentiation with the rest of the genomic regions in both P. davidiana and P. alba (the values are shown as mean ± standard deviation).
Parameters | Species | Regions diplaying high differentiation | Regions diplaying low differentiation | Background |
---|---|---|---|---|
θπ | P. davidiana | 0.0062(±0.0036)*** | 0.0346(±0.0253)*** | 0.0125(±0.0056) |
P. alba | 0.0089(±0.0045)*** | 0.0359(±0.0151)*** | 0.0159(±0.0023) | |
Tajima's D | P. davidiana | −0.9175(±0.5101)*** | −0.0650(±0.5126)*** | −0.2988(±0.5026) |
P. alba | −1.5966(±0.3958)*** | −0.6123(±0.5622)*** | −1.2113(±0.4562) | |
Fay&Wu's H | P. davidiana | −0.5995(±0.3658)*** | −0.1169(±0.2569)*** | −0.3898(±0.2759) |
P. alba | −0.5136(±0.3042)*** | −0.1154(±0.2368)*** | −0.3125(±0.2032) | |
r2 | P. davidiana | 0.2876(±0.1513)*** | 0.1969(±0.0926) | 0.2102(±0.1312) |
P. alba | 0.2428(±0.1368)*** | 0.1659(±0.0960)* | 0.1536(±0.1123) | |
ρ/θπ | P. davidiana | 0.1655(±0.2643)*** | 0.1142(±0.1199)** | 0.2332(±0.3502) |
P. alba | 0.2588(±0.3535)*** | 0.2066(±0.2356)** | 0.5399(±0.5201) | |
Fixed (%) | P. davidiana | 0.0565(±0.0315)*** | ~0(±0.0000)*** | 0.0055(±0.0099) |
P. alba | 0.0431(±0.0291)*** | ~0(±0.0000)*** | 0.0037(±0.0076) | |
Shared (%) | 0.0788(±0.0338)*** | 0.3466(±0.0933)*** | 0.1675(±0.0528) | |
FST | 0.7305(±0.0410)*** | 0.1125(±0.0179)*** | 0.3806(±0.1615) | |
dxy | 0.3036(±0.0025)*** | 0.0422(±0.0188)*** | 0.0252(±0.0121) | |
RND | 0.7261(±0.2365)*** | 0.6523(±0.1887)*** | 0.4998(±0.1501) |
Asterisks designate significant differences between the regions displaying exceptionally genetic differentiation and the rest of genomic regions by Mann-Whitney U test (*P < 0.05; **P < 1e-4; ***P < 2.2e-16).