Table 2.
Comparison of CHEK2 variants characteristics as determined by protein modeling
Mutation | Domain | Interaction(s) | Proposed impact | Functional data |
---|---|---|---|---|
S471F | Kinase/Dimer Interface | H-bonding | Abrogate interaction with residue R305 (intermolecular), and possibly residue Q476 (intramolecular) to destabilize the dimerization of CHEK2, reducing its efficacy of transphosphorylation and activation | Roeb et al, 2012 |
R160G | FHA-ligand interface | Cation-Pi | The loss of the positively charged guanidinium group likely abrogates the Cation-Pi interactions with His and Phe | Wu et al, 2006; Delimitsou et al, 2019; Roeb et al, 2012; Chrisanthar et al, 2008; Sodha et al, 2006 |
H186R | FHA domain | H-Bonding, Electrostatic | Introduction of bulky, constitutive charge within the core of the FHA domain, and removal of any potential for pH-dependent structural stability or ligand interaction. Similarly, H-bonding lost | Roeb et al, 2012; Walsh et al, 2011 |
R188W | FHA domain | Electrostatic, Cation-Pi, Salt Bridge | Loss of positive charge, trans-β-sheet salt bridge and Cation-Pi interactions | Wu et al, 2001; Li et al 2002; Delimitasou et al, 2019 |
I200T | FHA domain | Hydrophobic | Reduced hydrophobicity at a position proposed to be critical for hydrophobic driven dimerization and function | Falck et al, 2001a and 2001b; Kilpivaara et al, 2004; Li et al 2002; Roeb et al, 2012; Cai et al, 2009 |