Table 6.
RT-ddPCR reactions are specific for SARS-CoV-2. Sixteen SARS-CoV-2-negative clinical specimens and 24 specimens positive for additional respiratory viruses were tested both alone and with spiked-in RNA from each allele in all assay reactions. Allele determinations were made based on droplet amplitudes.
| Virus Tested | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| AdV | BoV | CoV: HKU1 | CoV: NL63 | IAV | MPV | PIV1 | PIV4 | RhV | ||
| Accession #s | SC7118 | SC5484 SC7321 | SC5834 SC5875 SC5891 SC5934 SC5982 SC6302 | SC5641 SC5968 SC6107 SC6263 | SC5416 SC5539 | SC5403 SC5517 | SC5381 | SC5375 SC6346 | SC5360 SC5382 | |
| Spike Tested | None | – | – | – | – | – | – | – | – | – |
| 417K | K | K | K | K | K | K | K | K | K | |
| 417N | N | N | N | N | N | N | N | N | N | |
| 417T | T | T | T | T | T | T | T | T | T | |
| None | – | – | – | – | – | – | – | – | – | |
| 484E | E | E | E | E | E | E | E | E | E | |
| 484K | K | K | K | K | K | K | K | K | K | |
| 484Q | Q | Q | Q | Q | Q | Q | Q | Q | Q | |
| None | – | – | – | – | – | – | – | – | – | |
| 452L | L | L | L | L | L | L | L | L | L | |
| 452R | R | R | R | R | R | R | R | R | R | |
| None | – | – | – | – | – | – | – | – | – | |
| 501N | N | N | N | N | N | N | N | N | N | |
| 501Y | Y | Y | Y | Y | Y | Y | Y | Y | Y | |