| Antibodies |
|
| Alexaflour-647 |
Novus Biologicals |
ab269823; RRID:AB_2892763
|
| CR3022 |
Sigma-Aldrich |
ZHU1077; RRID:AB_2848080
|
|
| Bacterial and virus strains |
|
| EHC-83E |
Mid-turbinate nasal swab |
SARS-CoV-2/human/USA/GA-EHC-083E/2020 |
| B.1.617.2 |
Mid-turbinate nasal swab |
hCoV-19/USA/PHC658/2021 |
| B.1.351 |
Dr. Andy Pekosz (John Hopkins University, Baltimore, MD) |
hCoV-19/South Africa/KRISP-K005325/2020 |
| B.1.1.529 |
Mid-turbinate nasal swab |
hCoV19/EHC_C19_2811C |
|
| Chemicals, peptides, and recombinant proteins |
|
| Methylcellulose |
Sigma-Aldrich |
Cat. #: M0512-250G |
|
| Critical commercial assays |
|
| Bright-Glo Luciferase Assay System |
Promega |
Cat# E2610 |
| Opti-MEM |
Life Technologies |
Cat# 31,985,062 |
|
| Experimental models: Cell lines |
|
| HEK 293T/17 cells |
American Type Culture Collection |
Cat# CRL-11268 |
| 293T/ACE2 cell |
Drs. Michael Farzan and Huihui Mu |
N/A |
| VeroE6 C1008 cells |
ATCC |
Cat# CRL-1586, RRID:CVCL_0574 |
|
| Recombinant DNA |
|
| VRC5601: pHR' CMV Luc |
Vaccine Research Center, NIH |
N/A |
| VRC5602: pCMV ΔR8.2 |
Vaccine Research Center, NIH |
N/A |
| VRC9260: TMPRSS2 |
Vaccine Research Center, NIH |
N/A |
| VRC7480 |
Vaccine Research Center, NIH |
N/A |
| VRC7480.D614G |
This paper |
N/A |
| VRC7480.Omicron.BA.1 |
This paper |
N/A |
| VRC7480.Omicron.BA.2 |
Genscript |
N/A |
| VRC7480.Omicron.BA.3 |
Genscript |
N/A |
| VRC7480.Omicron.BA.2.12.1 |
This paper |
N/A |
| VRC7480.Omicron.BA.4/BA.5 |
Genscript |
N/A |
|
| Software and algorithms |
|
| GraphPad Prism 9.2.0 |
San Diego, CA |
N/A |
| Viridot Program |
Katzelnick et al.14
|
https://github.com/leahkatzelnick/Viridot |
| R Version 4.1.3 |
R Foundation for Statistical Computing, Vienna, Austria. URL https://www.R-project.org/
|
N/A |
| SAS Version 9.4 |
SAS Institute Inc., Cary NC, USA |
N/A |