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. 2022 Jun 20;25(7):104646. doi: 10.1016/j.isci.2022.104646
REAGENT or RESOURCE SOURCE IDENTIFIER
Antibodies

Rabbit anti-GIGYF2 Proteintech Cat# 24790-1-AP; RRID:AB_2879727
Rabbit anti-DDX6 Proteintech Cat# 14632-1-AP; RRID:AB_2091264
Rabbit anti-CNOT9 Proteintech Cat# 22503-1-AP; RRID:AB_11232413
Rabbit anti-eIF4E2/4EHP Proteintech Cat# 12227-1-AP; RRID:AB_10642945
Mouse anti-GAPDH Proteintech Cat# 60004-1-Ig; RRID:AB_2107436
Rabbit anti-ZNF598 Thermo Fisher Scientific Cat# 703,601; RRID:AB_2815335
Mouse anti-Flag M2 Sigma-Aldrich Cat# F1804; RRID:AB_262044
Mouse anti-V5 tag Thermo Fisher Scientific Cat# R960-25; RRID:AB_2556564
Mouse anti-6xHis Thermo Fisher Scientific Cat# MA1-21315-HRP; RRID:AB_2536989
Goat anti-Rabbit IgG (H + L) Cross-Adsorbed Secondary Antibody, Alexa Fluor™ 488 Thermo Fisher Scientific Cat# A-11008; RRID:AB_143165
Goat anti-Mouse IgG (H + L) Cross-Adsorbed Secondary Antibody, Alexa Fluor 594 Thermo Fisher Scientific Cat# A-11005; RRID:AB_2534073
Sheep anti-Mouse IgG - Horseradish Peroxidase GE Healthcare Cat# NA931; RRID:AB_772210
Goat anti-Rabbit IgG - Peroxidase Sigma-Aldrich Cat# A6154; RRID:AB_258284

Bacterial and virus strains

BL21 (DE3) Gold competent ells Agilent Cat# 230,132
BL21-CodonPlus (DE3) competent cells Agilent Cat# 230,245
DH5α competent cells Thermo Fisher Scientific Cat# 18,265,017

Chemicals, peptides, and recombinant proteins

Recombinant His6-NSP2 This paper N/A
Recombinant His6-NSP21−115 This paper N/A
Recombinant His6-NSP2107−212 This paper N/A
Recombinant His6-NSP2204−350 This paper N/A
Recombinant His6-NSP2G262/265V This paper N/A
Recombinant GIGYF2743−1,085 This paper N/A
Recombinant 4EHP This paper N/A
Biotinylated isoxazole Sigma-Aldrich Cat# 900,572

Critical commercial assays

Duolink In Situ Red Kit Sigma-Aldrich Cat# DUO92101
Dual luciferase assay Promega Cat# E1960

Experimental models: Cell lines

HEK293T cells Sigma-Aldrich Cat# 12,022,001-1VL
Flp-In T-REx HEK293 cells Thermo Fisher Scientific Cat# R78007
4EHPKO Flp-In T-REx HEK293 cells (Jafarnejad et al., 2018) N/A
GIGYF2KO Flp-In T-REx HEK293 cells This paper N/A

Recombinant DNA

Plasmid: pFRT/TO/FLAG/HA-DEST TNRC6C (Landthaler et al., 2008) Addgene plasmid #19885
Plasmid: pcDNA5-FRT-TO-FH-NSP2 David Tollervey (Unpublished) Addgene plasmid #157683
Plasmid: pcDNA5-FRT-TO-FH-NSP2 G262V/G265V This paper N/A
Plasmid: pcDNA5-FRT-TO-FH-NSP21−212 This paper N/A
Plasmid: pcDNA5-FRT-TO-FH-NSP21−350 This paper N/A
Plasmid: pcDNA5-FRT-TO-FH-NSP21−509 This paper N/A
Plasmid: pcDNA5-FRT-TO-FH-NSP2107−638 This paper N/A
Plasmid: pcDNA5-FRT-TO-FH-NSP2204−638 This paper N/A
Plasmid: pcDNA5-FRT-TO-FH-NSP2340−638 This paper N/A
Plasmid: pSpCas9(BB)-2A-Puro (Ran et al., 2013) Addgene plasmid #62988
Plasmid: pSpCas9(BB)-2A-Puro-Gigyf2-sgRNA This paper N/A
Plasmid: pET28-His6-ZZ (Barbarin-Bocahu and Graille, 2022) N/A
Plasmid: pET28-His6-ZZ-NSP2 This paper N/A
Plasmid: pET28-His6-ZZ-NSP2 G262V/G265V This paper N/A
Plasmid: pET28-His6-ZZ-NSP21−115 This paper N/A
Plasmid: pET28-His6-ZZ-NSP2107−212 This paper N/A
Plasmid: pET28-His6-ZZ-NSP2204−350 This paper N/A
Plasmid: pCI-Neo Promega Cat# E1841
Plasmid: pCI-Neo-V5-GIGYF2 This paper N/A
Plasmid: pCI-Neo-V5-GIGYF21−267 This paper N/A
Plasmid: pCI-Neo-V5-GIGYF2258−495 This paper N/A
Plasmid: pCI-Neo-V5-GIGYF2486−752 This paper N/A
Plasmid: pCI-Neo-V5-GIGYF2743−1,085 This paper N/A
Plasmid: pCI-Neo-V5-GIGYF21,076-1,320 This paper N/A
Plasmid: pCI-Neo-V5-4EHP This paper N/A
Plasmid: pCI-Neo-V5-4EHP W95A This paper N/A
Plasmid: pGEX-6P-1 Amersham Cat# 27-4597-01
Plasmid: pGEX-6P-1-4EHP This paper N/A
Plasmid: pGEX-6P-1-GIGYF2743−1,085 This paper N/A
Plasmid: pCI-Neo-λNV5-GIGYF2 This paper N/A
Plasmid: pCI-Neo-λNV5-GW182SD This paper N/A
Plasmid: pCI-Neo-λNV5-GW182SD ΔPPGL This paper N/A
Plasmid: psiCHECK-2 Promega Cat# C802A
Plasmid: psiCHECK-2-Ifnb1 3′ UTR (Zhang et al., 2021) N/A
Plasmid: pCI-Neo-RLuc-5BoxB-A114-N40-HhR (Chapat et al., 2017b) N/A
Plasmid: pCI-Neo-RLuc-5BoxB (Pillai et al., 2004) N/A
Plasmid: pCI-Neo-RLuc-6let7a (Pillai et al., 2004) N/A
Plasmid: pCI- Neo-FLuc (Pillai et al., 2004) N/A

Software and algorithms

Fiji Fiji RRID: SCR_002285
Prism 9 GraphPad RRID:SCR_002798
Illustrator CS6 Adobe RRID:SCR_010279
ChimeraX UCSF RRID:SCR_015872
Image Lab Software Bio-Rad RRID:SCR_014210
Jalview Jalview RRID:SCR_006459