Table 3.

Correlation between SNPs associated with different repair genes and allele instability.

SNP	Candidate modifier gene(s) (and distance in kb)	Test allele	Effect (Std. Error)	p-value	HW p-val
rs1650742	MSH3 (0), DHFR (40.1)	T	0.12 (0.08)	0.12	0.37
rs1799977	MLH1 (0)	G	− 0.03 (0.08)	0.73	0.93
rs274883	LIG1 (0)	G	− 0.001 (0.09)	0.99	0.31
rs34017474	FAN1 (0), MTMR10 (0)	T	− 0.02 (0.07)	0.78	0.8
rs35811129	FAN1 (6.04) & MTMR10 (0)	G	0.02 (0.08)	0.78	0.38
rs3791767	PMS1 (8.8)	C	− 0.07 (0.09)	0.4	0.06
rs701383	DHFR (8.77), MSH3 (37.2)	G	− 0.22 (0.08)	0.007	0.86
rs74302792	PMS2 (31.3)	T	− 0.05 (0.11)	0.61	0.81
rs145821638	LIG1 (0)	C	− 0.11 (0.53)	0.84	0.94
rs150393409	FAN1 (0)	G	− 0.70 (0.31)	0.02	0.74