Table 1.
Statistics of S. apiana single-molecule real-time (SMRT) sequencing results.
Project | SMRT |
---|---|
Total subreads | 36,953,062 |
Total subread nucleotides (bp) | 39,303,737,421 |
CCS reads | 310,713 |
FLNC reads | 189,999 |
Consensus reads | 110,985 |
Representative transcripts | 78,009 |
Total size (bp) of representative transcripts | 81,125,619 |
GC content | 0.44 |
Transcript length range (bp) | 51–6,262 |
Average transcript size (bp) | 1,039.95 |
Median transcript size (bp) | 910 |
N50 transcript size | 1,466 |
Transcripts with functional annotation | 61,659 |
Nr | 61,469 |
Swiss-Prot | 48,135 |
Pfam | 43,373 |
KEGG (KO) | 31,950 |
COG | 55,743 |
GO | 54,710 |