Table 1.
Statistics of S. apiana single-molecule real-time (SMRT) sequencing results.
| Project | SMRT |
|---|---|
| Total subreads | 36,953,062 |
| Total subread nucleotides (bp) | 39,303,737,421 |
| CCS reads | 310,713 |
| FLNC reads | 189,999 |
| Consensus reads | 110,985 |
| Representative transcripts | 78,009 |
| Total size (bp) of representative transcripts | 81,125,619 |
| GC content | 0.44 |
| Transcript length range (bp) | 51–6,262 |
| Average transcript size (bp) | 1,039.95 |
| Median transcript size (bp) | 910 |
| N50 transcript size | 1,466 |
| Transcripts with functional annotation | 61,659 |
| Nr | 61,469 |
| Swiss-Prot | 48,135 |
| Pfam | 43,373 |
| KEGG (KO) | 31,950 |
| COG | 55,743 |
| GO | 54,710 |