Table 3.
Coding of potential and putative transcription regulatory sequences of the GH8-2 genome.
| ORF | Location (nt) | Length(nt) | Length (aa) | TRS location | TRS sequencea |
|---|---|---|---|---|---|
| 1ab | 312-20,359 (shift at 12,329) |
20,049 | 6,682 | 94 | TCGAACTAAACGAAAT |
| S | 20,356-24,729 | 4,374 | 1,457 | 20,324 | AGTTACTAAACTTTGG |
| 3a | 24,793-25,029 | 237 | 78 | 24,785 | AAGAACTAAACTTATG |
| 3c | 25,175-25,909 | 735 | 244 | 24,977 | ATATGCTAAACTTGGT |
| E | 25,896-26,144 | 249 | 82 | 25,853 | CGGTTCTAAACGAAAT |
| M | 26,155-26,943 | 789 | 262 | 26,146 | TTGAACTAAACAAAAT |
| N | 26,956-28,104 | 1,149 | 382 | 26,944 | TATAACTAAACTTCTA |
| 7a | 28,109-28,414 | 306 | 101 | 28,101 | ACGAACTAAACGAATG |
| 7b | 28,419-29,060 | 642 | 213 |
a
Underlined and bold type indicates the conserved nt in the TRS core sequence.