Supplementary Table S11.
List of Significant Associations in Host Microbial Multiomics Network
From | To | Cor | P-Value | Padj | Greedy Membership |
---|---|---|---|---|---|
Significant associations in health-associated network | |||||
s__Catenibacterium_mitsuokai | CD8_TNFa_only | 0.80837 | 0.000118 | 0.047311 | 1 |
PWY4FS-7: phosphatidylglycerol biosynthesis I (plastidic) | Teff_IFNg_Only | 0.643956 | 0.00019 | 0.095866 | |
PWY4FS-8: phosphatidylglycerol biosynthesis II (non-plastidic) | Teff_IFNg_Only | 0.643956 | 0.00019 | 0.095866 | |
PWY4FS-7: phosphatidylglycerol biosynthesis I (plastidic) | Teff_TNFa_INFg | 0.621978 | 1.49E–06 | 0.003106 | |
PWY4FS-8: phosphatidylglycerol biosynthesis II (non-plastidic) | Teff_TNFa_INFg | 0.621978 | 1.49E–06 | 0.003106 | |
CD8_TNFa_only | IL1R2 | ‒0.68647 | 2.35E–06 | 0.006511 | |
s__Catenibacterium_mitsuokai | NOS2 | 0.805281 | 0.000223 | 0.096093 | |
Teff_TNFa_INFg | NOS2 | 0.775824 | 0.000257 | 0.091006 | |
CD8_TNFa_only | ST6GAL2 | ‒0.64466 | 3.23E–05 | 0.030873 | |
s__Catenibacterium_mitsuokai | ST6GAL2 | ‒0.66447 | 4.78E–06 | 0.005155 | |
PHOSLIPSYN-PWY: superpathway of phospholipid biosynthesis I (bacteria) | CD8_IFNg_only | 0.767033 | 0.000162 | 0.092121 | 2 |
Treg_INFg_only | CCDC144A | 0.749451 | 0.000105 | 0.062263 | |
Treg_INFg_only | RP11-219A15.1 | 0.796066 | 2.5E–05 | 0.02777 | |
CD8_IFNg_only | RP11-336A10.5 | 0.818482 | 2.1E–05 | 0.02777 | |
CD8_IL22_only | RP11-336A10.5 | 0.752476 | 0.000181 | 0.080494 | |
Treg_INFg_only | RP11-336A10.5 | 0.673268 | 0.000104 | 0.062263 | |
Treg_TNFa_IFNg | RP11-336A10.5 | 0.790289 | 0.000219 | 0.088193 | |
Treg_INFg_only | USP32P1 | 0.783672 | 0.000112 | 0.06403 | |
PWY-6125: superpathway of guanosine nucleotides de novo biosynthesis II | activated.memory.Teff | 0.686469 | 0.000357 | 0.021066 | 3 |
PWY-7184: pyrimidine deoxyribonucleotides de novo biosynthesis I | activated.memory.Teff | 0.638767 | 0.000445 | 0.025005 | |
PWY-7197: pyrimidine deoxyribonucleotide phosphorylation | activated.memory.Teff | 0.613862 | 0.001624 | 0.073648 | |
s__Escherichia_coli | activated.memory.Teff | 0.60066 | 1.89E–05 | 0.003131 | |
FUC-RHAMCAT-PWY: super pathway of fucose and rhamnose degradation | Active.Teff | 0.786207 | 0.001056 | 0.051489 | |
PWY-6125: super pathway of guanosine nucleotides de novo biosynthesis II | Active.Teff | 0.63631 | 0.001602 | 0.073212 | |
PWY-6628: superpathway of L-phenylalanine biosynthesis | Active.Teff | 0.728019 | 7.38E–06 | 0.0016 | |
s__Escherichia_coli | Active.Teff | 0.660784 | 8.59E–06 | 0.001669 | |
UniRef90_K6B179: NO_NAME | Active.Teff | 0.604715 | 1.58E–06 | 0.041485 | |
s__Eubacterium_ventriosum | IGLV8-61 | ‒0.73511 | 0.000141 | 0.073261 | 4 |
s__Ruminococcus_obeum | IGLV8-61 | ‒0.6 | 0.000147 | 0.0755 | |
UniRef90_A5ZMH0: NO_NAME | IGLV8-61 | ‒0.81588 | 2.75E–06 | 0.065021 | |
UniRef90_D4LLH7: ATPases involved in chromosome partitioning | IGLV8-61 | ‒0.76686 | 3.19E–06 | 0.070247 | |
UniRef90_R6S2S2: Ketol-acid reductoisomerase | IGLV8-61 | ‒0.71356 | 5.13E–06 | 0.091049 | |
GLYCOLYSIS: glycolysis I (from glucose 6-phosphate) | memory.CD8 | 0.78022 | 0.000181 | 0.011891 | 5 |
PWY-5484: glycolysis II (from fructose 6-phosphate) | memory.CD8 | 0.789011 | 0.000203 | 0.013021 | |
UniRef90_D4M0P1: ADP-ribose pyrophosphatase | memory.CD8 | 0.899252 | 1.03E–05 | 0.087323 | |
NONOXIPENT-PWY: pentose phosphate pathway (non-oxidative branch) | RP11-716A19.3 | 0.61012 | 7.69E–06 | 0.031569 | 6 |
UniRef90_R7JV77: NO_NAME | RP11-716A19.3 | 0.610793 | 4.62E–06 | 0.086393 | |
NONOXIPENT-PWY: pentose phosphate pathway (non-oxidative branch) | RP4-672N11.1 | 0.61012 | 7.69E–06 | 0.031569 | |
UniRef90_R7JV77: NO_NAME | RP4-672N11.1 | 0.610793 | 4.62E–06 | 0.086393 | |
PPGPPMET-PWY: ppGpp biosynthesis | activated.memory.CD8 | 0.601323 | 0.001952 | 0.08521 | 7 |
PWY-821: superpathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae) | activated.memory.CD8 | 0.686806 | 7.64E–05 | 0.006382 | |
NONMEVIPP-PWY: methylerythritol phosphate pathway I | ADGRG7 | 0.868132 | 2.01E–05 | 0.062622 | 8 |
s__Prevotella_copri | ADGRG7 | 0.871288 | 3.52E–05 | 0.0262 | |
GLUCUROCAT-PWY: superpathway of β-D-glucuronide and D-glucuronate degradation | SULT1C2 | ‒0.92527 | 2.97E–05 | 0.078414 | 9 |
UniRef90_D4K8E3: Predicted phosphatase homologous to the C-terminal domain of histone macroH2A1 | SULT1C2 | ‒0.9083 | 7.16E–07 | 0.027384 | |
CD8_Immune.function | ZG16 | 0.732674 | 0.000189 | 0.080761 | 10 |
CD8_Immune.Pop | ZG16 | 0.767033 | 3.68E–05 | 0.065578 | |
UniRef90_C7H1R7: NO_NAME | MST1L | ‒0.90309 | 1.41E–06 | 0.040723 | 11 |
UniRef90_C7H1R7: NO_NAME | MST1P2 | ‒0.89428 | 3.41E–07 | 0.020076 | |
s__Eubacterium_hallii | AP000350.5 | 0.91339 | 9.22E–05 | 0.05574 | 12 |
s__Eubacterium_hallii | AP000350.6 | 0.792502 | 0.000112 | 0.062974 | |
UniRef90_D4K1Q8: Predicted integral membrane protein | HELLPAR | 0.719472 | 1.51E–06 | 0.04237 | 13 |
UniRef90_E2ZN70: NO_NAME | HELLPAR | 0.803967 | 4.87E–06 | 0.089006 | |
s__Bacteroides_dorei | LL22NC03-23C6.12 | 0.61662 | 7.52E–05 | 0.049355 | 14 |
s__Bacteroides_dorei | RP11-174O3.6 | 0.604902 | 9.1E–05 | 0.055665 | |
UniRef90_G2SYP7: NO_NAME | RP11-745A24.3 | 0.704199 | 2.9E–06 | 0.065432 | 15 |
UniRef90_G2T527: Filamentation induced by cAMP protein Fic | RP11-745A24.3 | 0.72507 | 3.86E–06 | 0.07883 | |
Teff_TNFa_only | IGHV6-1 | ‒0.80968 | 2.48E–05 | 0.02777 | 16 |
Teff_TNFa_only | REG1A | 0.610445 | 7.99E–05 | 0.062263 | |
PWY-7219: adenosine ribonucleotides de novo biosynthesis | ITGA2 | ‒0.91969 | 2.74E–05 | 0.076724 | 17 |
s__Dorea_formicigenerans | Teff_Immune.Pop | ‒0.91209 | 0.000234 | 0.020021 | 18 |
Treg_IL17_IL22 | IGLV2-18 | ‒0.76005 | 0.000208 | 0.086495 | 19 |
CD8_TNFa_IFNg | TM4SF1 | ‒0.65714 | 0.000312 | 0.098059 | 20 |
UniRef90_R6LGS5: NO_NAME | AC131056.3 | ‒0.89989 | 2.79E–06 | 0.065021 | 21 |
ILC3 | IGHD | 0.748352 | 7.96E–06 | 0.018936 | 22 |
UniRef90_R5TP61: 50S ribosomal protein L30 | IGHV3-33 | ‒0.70751 | 1.16E–06 | 0.036628 | 23 |
UniRef90_R9HTU6: NO_NAME | FTMT | 0.612826 | 1.82E–07 | 0.012321 | 24 |
PWY-5177: glutaryl-CoA degradation | CDA | 0.816282 | 1.43E–05 | 0.049172 | 25 |
s__Ruminococcus_lactaris | EML6 | 0.76199 | 4.06E–05 | 0.029981 | 26 |
PWY-7328: superpathway of UDP-glucose-derived O-antigen building blocks biosynthesis | IL17F | 0.780793 | 2.95E–05 | 0.078414 | 27 |
UniRef90_D4KCX5: Rhamnulose-1-phosphate aldolase | CD177P1 | 0.963551 | 2.32E–06 | 0.056574 | 28 |
PWY0-1061: superpathway of L-alanine biosynthesis | CD8_IL17_only | 0.760754 | 4.74E–06 | 0.006165 | 29 |
s__Ruminococcus_sp_5_1_39BFAA | CD19 | 0.781079 | 0.000124 | 0.066737 | 30 |
Significant associations in psoriasis-associated network | |||||
1CMET2-PWY: N10-formyl-tetrahydrofolate biosynthesis | GAPDHP1 | ‒0.6841 | 9.75E–05 | 0.064441 | 1 |
ARGININE-SYN4-PWY: L-ornithine de novo biosynthesis | GAPDHP1 | ‒0.7126 | 2.17E–05 | 0.023794 | |
PWY-3841: folate transformations II | GAPDHP1 | ‒0.65402 | 0.00017 | 0.092741 | |
PWY-5101: L-isoleucine biosynthesis II | GAPDHP1 | ‒0.68194 | 0.000136 | 0.080946 | |
PWY-6353: purine nucleotides degradation II (aerobic) | GAPDHP1 | 0.663131 | 0.000167 | 0.091415 | |
PWY-7282: 4-amino-2-methyl-5-phosphomethylpyrimidine biosynthesis (yeast) | GAPDHP1 | ‒0.69345 | 2.78E–05 | 0.027634 | |
PWY0-845: super pathway of pyridoxal 5-phosphate biosynthesis and salvage | GAPDHP1 | ‒0.71761 | 9.73E–06 | 0.013577 | |
PYRIDOXSYN-PWY: pyridoxal 5-phosphate biosynthesis I | GAPDHP1 | ‒0.71319 | 1.28E–05 | 0.01645 | |
UniRef90_A7V4G2: NO_NAME | GAPDHP1 | ‒0.75316 | 5.57E–06 | 0.058996 | |
UniRef90_Q5LC85: Elongation factor 4 | GAPDHP1 | ‒0.75949 | 1.37E–06 | 0.02837 | |
UniRef90_Q5LES4: Sulfate adenylyltransferase subunit 2 | GAPDHP1 | ‒0.78468 | 1.2E–06 | 0.027047 | |
ARGININE-SYN4-PWY: L-ornithine de novo biosynthesis | MIR222HG | 0.677723 | 0.000185 | 0.098183 | |
PWY-6703: preQ0 biosynthesis | MIR222HG | 0.635198 | 0.000171 | 0.092877 | |
PWY0-845: super pathway of pyridoxal 5-phosphate biosynthesis and salvage | MIR222HG | 0.697094 | 0.000186 | 0.098528 | |
s__Bacteroides_uniformis | MIR222HG | 0.718291 | 8.08E–05 | 0.030159 | |
PWY-6353: purine nucleotides degradation II (aerobic) | MTND1P23 | ‒0.73465 | 9.63E–05 | 0.06407 | |
s__Bacteroides_uniformis | NPIPB15 | ‒0.60205 | 0.000127 | 0.043035 | |
PWY-6703: preQ0 biosynthesis | NUAK2 | ‒0.69266 | 0.000187 | 0.098672 | |
ARGININE-SYN4-PWY: L-ornithine de novo biosynthesis | RN7SKP299 | 0.705078 | 0.000141 | 0.082044 | |
PWY-5101: L-isoleucine biosynthesis II | RN7SKP299 | 0.773598 | 1.22E–05 | 0.01603 | |
ARGININE-SYN4-PWY: L-ornithine de novo biosynthesis | RP11-16E12.2 | ‒0.71602 | 0.000189 | 0.098755 | |
UniRef90_R5EN96: NO_NAME | AP001627.1 | 0.718549 | 7.47E–06 | 0.070498 | 2 |
UniRef90_R5ENA5: NO_NAME | AP001627.1 | 0.705786 | 5.84E–06 | 0.060871 | |
UniRef90_R5ENA9: NO_NAME | AP001627.1 | 0.651182 | 7.75E–06 | 0.072187 | |
UniRef90_R5ENB7: NO_NAME | AP001627.1 | 0.676065 | 4.98E–06 | 0.05694 | |
UniRef90_R5ENC3: NO_NAME | AP001627.1 | 0.695925 | 6.58E–06 | 0.065657 | |
UniRef90_R5END3: NO_NAME | AP001627.1 | 0.660024 | 8.62E–06 | 0.075666 | |
UniRef90_R5ENY1: NO_NAME | AP001627.1 | 0.678813 | 5.08E–06 | 0.057196 | |
UniRef90_R5ENZ3: NO_NAME | AP001627.1 | 0.660032 | 9.77E–06 | 0.080475 | |
UniRef90_R5EP09: NO_NAME | AP001627.1 | 0.607497 | 9.06E–06 | 0.077542 | |
UniRef90_R5ES58: NO_NAME | AP001627.1 | 0.712702 | 7.09E–06 | 0.068494 | |
UniRef90_R5ES70: NO_NAME | AP001627.1 | 0.698935 | 5.74E–06 | 0.06032 | |
UniRef90_R5ES82: NO_NAME | AP001627.1 | 0.726586 | 7.68E–06 | 0.072187 | |
UniRef90_R5EXU5: NO_NAME | AP001627.1 | 0.665197 | 7.19E–06 | 0.069054 | |
UniRef90_R5F071: NO_NAME | AP001627.1 | 0.690192 | 6.4E–06 | 0.064816 | |
UniRef90_R5F076: NO_NAME | AP001627.1 | 0.759732 | 4.82E–06 | 0.056148 | |
UniRef90_R5F1R6: NO_NAME | AP001627.1 | 0.669014 | 9.65E–06 | 0.080053 | |
UniRef90_R5F1S4: NO_NAME | AP001627.1 | 0.698402 | 5.46E–06 | 0.058301 | |
UniRef90_R5F1T5: NO_NAME | AP001627.1 | 0.677638 | 3.89E–06 | 0.051875 | |
UniRef90_R5VN00: NO_NAME | AP001627.1 | 0.707391 | 5.26E–06 | 0.057636 | |
UniRef90_C7H6T5: NO_NAME | CXCL1 | 0.607639 | 1.68E–07 | 0.006928 | 3 |
UniRef90_C7H6T5: NO_NAME | CXCL3 | 0.62271 | 3.3E–08 | 0.002159 | |
UniRef90_G2T376: NO_NAME | CXCL3 | 0.61847 | 9.73E–10 | 0.000185 | |
UniRef90_G2T5J9: NO_NAME | CXCL3 | 0.607058 | 2.91E–08 | 0.001971 | |
PWY-7196: superpathway of pyrimidine ribonucleosides salvage | Teff_IL17_IL22 | 0.703267 | 0.00045 | 0.078835 | 4 |
PWY-7196: superpathway of pyrimidine ribonucleosides salvage | Teff_IL17_only | 0.62053 | 0.000127 | 0.064567 | |
PPGPPMET-PWY: ppGpp biosynthesis | Treg_IL17_only | 0.607528 | 0.000525 | 0.085532 | |
PWY-7196: superpathway of pyrimidine ribonucleosides salvage | Treg_IL17_only | 0.630174 | 0.000704 | 0.095585 | |
COLANSYN-PWY: colanic acid building blocks biosynthesis | IGHV3-30 | ‒0.6278 | 0.000129 | 0.077505 | 5 |
PWY-7323: super pathway of GDP-mannose-derived O-antigen building blocks biosynthesis | IGHV3-30 | ‒0.62012 | 5.2E–05 | 0.043212 | |
COLANSYN-PWY: colanic acid building blocks biosynthesis | RP11-16E12.2 | ‒0.61959 | 0.00017 | 0.092741 | |
ANAGLYCOLYSIS-PWY: glycolysis III (from glucose) | IGHV2-70 | ‒0.69299 | 2.94E–05 | 0.028746 | 6 |
CALVIN-PWY: Calvin-Benson-Bassham cycle | IGHV2-70 | ‒0.75205 | 9.6E–06 | 0.01349 | |
NONOXIPENT-PWY: pentose phosphate pathway (non-oxidative branch) | IGHV2-70 | ‒0.75603 | 1.87E–05 | 0.021434 | |
PWY-1042: glycolysis IV (plant cytosol) | IGHV2-70 | ‒0.73312 | 2.18E–06 | 0.00494 | |
PWY-7242: D-fructuronate degradation | IGHV2-70 | ‒0.69802 | 8.1E–05 | 0.056949 | |
COA-PWY: coenzyme A biosynthesis I | MTND2P28 | ‒0.61331 | 1.79E–05 | 0.020776 | 7 |
FAO-PWY: fatty acid β-oxidation I | MTND2P28 | ‒0.64143 | 2.21E–05 | 0.023794 | |
PWY-5100: pyruvate fermentation to acetate and lactate II | MTND2P28 | ‒0.66359 | 5.47E–05 | 0.044043 | |
PWY-5136: fatty acid β-oxidation II (peroxisome) | MTND2P28 | ‒0.61916 | 3.21E–05 | 0.030777 | |
PWY-1269: CMP-3-deoxy-D-manno-octulosonate biosynthesis I | Vd2 | 0.679672 | 0.000179 | 0.071033 | 8 |
PWY-1269: CMP-3-deoxy-D-manno-octulosonate biosynthesis I | Vd2T | 0.661191 | 0.000251 | 0.022565 | |
PWY-1269: CMP-3-deoxy-D-manno-octulosonate biosynthesis I | IGHV2-26 | ‒0.63313 | 0.000189 | 0.098755 | |
HEME-BIOSYNTHESIS-II: heme biosynthesis I (aerobic) | IGKV1-17 | ‒0.74011 | 4.13E–05 | 0.036607 | 9 |
PWY-5918: super pathway of heme biosynthesis from glutamate | IGKV1-17 | ‒0.71627 | 0.000159 | 0.087773 | |
s__Streptococcus_parasanguinis | KRTAP13-2 | ‒0.6127 | 1.05E–05 | 0.006086 | 10 |
s__Streptococcus_parasanguinis | RN7SL65P | ‒0.62108 | 5.04E–06 | 0.003209 | |
s__Dorea_formicigenerans | CD8_TNFa_IFNg | 0.651556 | 0.000876 | 0.036379 | 11 |
UniRef90_G1WU72: NO_NAME | CD8_TNFa_IFNg | 0.641326 | 6.26E–05 | 0.083128 | |
PWY-5384: sucrose degradation IV (sucrose phosphorylase) | AGAP12P | 0.660269 | 2.54E–05 | 0.026031 | 12 |
PWY-5384: sucrose degradation IV (sucrose phosphorylase) | NPIPB1P | 0.648085 | 0.000185 | 0.098183 | |
UniRef90_C9YMF0: Sigma-24 (Feci) | IL1RN | 0.810404 | 8.15E–06 | 0.074295 | 13 |
UniRef90_D4L1Z0: DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog | IL1RN | 0.807528 | 7.07E–06 | 0.068494 | |
PWY-3001: super pathway of L-isoleucine biosynthesis I | Treg_TNFa_IFNg | ‒0.63367 | 0.000231 | 0.071033 | 14 |
THRESYN-PWY: super pathway of L-threonine biosynthesis | Treg_TNFa_IFNg | ‒0.72483 | 7.24E–05 | 0.050646 | |
P461-PWY: hexitol fermentation to lactate, formate, ethanol and acetate | SIGLEC12 | 0.722109 | 7.4E–05 | 0.053292 | 15 |
UniRef90_R6SAP9: Orotate phosphoribosyltransferase | SIGLEC12 | 0.743519 | 2.73E–06 | 0.040374 | |
FUC-RHAMCAT-PWY: super pathway of fucose and rhamnose degradation | RP11-693J15.5 | 0.622961 | 0.000178 | 0.095618 | 16 |
UniRef90_R5DXN6: NO_NAME | TMEM72 | ‒0.6137 | 9.9E–06 | 0.081082 | 17 |
PWY-5695: urate biosynthesis/inosine 5-phosphate degradation | IGHV3-53 | ‒0.7541 | 0.000161 | 0.088313 | 18 |
UniRef90_R5J0A8: Transposase IS605 OrfB family central region | SLC6A14 | 0.727059 | 9.13E–06 | 0.077542 | 19 |
UniRef90_R9HTU6: NO_NAME | RPL6P12 | 0.644934 | 1.12E–05 | 0.087267 | 20 |
UniRef90_D4K3E4: Desulfoferrodoxin ferrous iron-binding domain | IGLV5-45 | 0.677288 | 6.46E–06 | 0.065139 | 21 |
s__Odoribacter_splanchnicus | PCK1 | ‒0.67833 | 4.84E–05 | 0.020322 | 22 |
UniRef90_C7H7L8: NO_NAME | LL22NC03-23C6.12 | 0.603595 | 6.12E–09 | 0.000802 | 23 |
Vd2T_TNFa_IFNg | KLK10 | 0.719637 | 7.31E–09 | 2.1E–05 | 24 |
UniRef90_C4ZEM9: NO_NAME | REG1A | 0.653404 | 3.24E–07 | 0.010793 | 25 |
UniRef90_R5J281: NO_NAME | Treg_TNFa | 0.66736 | 2.24E–07 | 0.004274 | 26 |
UniRef90_A8SCB2: NO_NAME | GSTA1 | ‒0.64042 | 4E–06 | 0.052695 | 27 |
Treg_INFg_only | FOS | 0.640109 | 1.57E–05 | 0.015843 | 28 |
PWY-5345: super pathway of L-methionine biosynthesis (by sulfhydrylation) | Teff_IFNg_Only | ‒0.67739 | 0.000424 | 0.078253 | 29 |
P185-PWY: formaldehyde assimilation III (dihydroxyacetone cycle) | IGLV4-60 | ‒0.68048 | 9.42E–05 | 0.063081 | 30 |
UniRef90_V8CHB5: NO_NAME | DSG3 | 0.644924 | 2.65E–06 | 0.039778 | 31 |
PWY0-1296: purine ribonucleosides degradation | ALDH1L1 | 0.623461 | 0.000178 | 0.095618 | 32 |
HEMESYN2-PWY: heme biosynthesis II (anaerobic) | Teff_Immune.Pop | ‒0.6012 | 0.001917 | 0.065199 | 33 |
s__Alistipes_shahii | ADAMTS4 | 0.607468 | 0.000263 | 0.071968 | 34 |
s__Bacteroidales_bacterium_ph8 | IL22 | 0.621457 | 1.92E–07 | 0.000212 | 35 |
Significant associations in PSO1-associated network | |||||
activated.memory.CD8 | RP11-299L17.3 | 0.650444 | 1.13E–06 | 0.00596 | 1 |
activated.nonMemory.CD8 | RP11-299L17.3 | 0.650444 | 1.79E–07 | 0.001895 | |
activeCD8 | RP11-299L17.3 | 0.650444 | 2.14E–06 | 0.007538 | |
UniRef90_D4JPG6: NO_NAME | RP11-299L17.3 | 0.65273 | 1.51E–06 | 0.090737 | |
UniRef90_U4D938: NO_NAME | RP11-299L17.3 | 0.651584 | 1.37E–07 | 0.030625 | |
UniRef90_D4LM01: Site-specific recombinase XerD | activated.memory.CD8 | 0.804932 | 0.000156 | 0.095101 | |
UniRef90_D4LWR3: RNA polymerase sigma factor, sigma-70 family | activated.memory.CD8 | 0.712285 | 1.54E–05 | 0.033677 | |
UniRef90_D4MWC2: Replication initiator protein A (RepA) N-terminus | activated.memory.CD8 | 0.642109 | 3.2E–05 | 0.047927 | |
UniRef90_U4D938: NO_NAME | activated.memory.CD8 | 0.612961 | 3.6E–05 | 0.047962 | |
UniRef90_D4LWR3: RNA polymerase sigma factor, sigma-70 family | activated.memory.Teff | 0.648507 | 2.11E–05 | 0.038011 | |
UniRef90_C4Z761: Citrate synthase | activeCD8 | 0.617548 | 0.000109 | 0.08439 | |
UniRef90_G2T5D6: Glutathione synthase | activeCD8 | 0.624565 | 3.18E–05 | 0.047927 | |
s__Flavonifractor_plautii | activated.nonMemory.Teff | 0.666676 | 6.31E–10 | 1.56E–07 | 2 |
s__Ruminococcus_sp_5_1_39BFAA | activated.nonMemory.Teff | 0.616463 | 0.000705 | 0.069518 | |
UniRef90_C6JCI4: NO_NAME | activated.nonMemory.Teff | 0.645614 | 0.000177 | 0.098154 | |
UniRef90_D4LLE0: Aldehyde dehydrogenase, molybdenum-binding subunit apoprotein | activated.nonMemory.Teff | 0.660215 | 9.81E–05 | 0.082059 | |
UniRef90_R5HR90: NO_NAME | activated.nonMemory.Teff | 0.635567 | 6.87E–05 | 0.069169 | |
UniRef90_R5HVG1: NO_NAME | activated.nonMemory.Teff | 0.690686 | 1.74E–05 | 0.034534 | |
UniRef90_R5I7T7: ATP-dependent 6-phosphofructokinase | activated.nonMemory.Teff | 0.695959 | 0.000192 | 0.098154 | |
UniRef90_R5XT20: Rhamnulose-1-phosphate aldolase | activated.nonMemory.Teff | 0.706504 | 0.000132 | 0.092377 | |
UniRef90_R6GH13: NO_NAME | activated.nonMemory.Teff | 0.731108 | 3.57E–05 | 0.047962 | |
UniRef90_R6PH30: NO_NAME | activated.nonMemory.Teff | 0.682456 | 1.65E–05 | 0.034534 | |
UniRef90_R6Q745: NO_NAME | activated.nonMemory.Teff | 0.742962 | 2.36E–05 | 0.040223 | |
UniRef90_R7CD60: NO_NAME | activated.nonMemory.Teff | 0.695959 | 8.4E–05 | 0.076379 | |
UniRef90_R7CD72: NO_NAME | activated.nonMemory.Teff | 0.695959 | 0.000145 | 0.092467 | |
UniRef90_R7CDD0: NO_NAME | activated.nonMemory.Teff | 0.700709 | 0.000163 | 0.096324 | |
UniRef90_R7CGR6: NO_NAME | activated.nonMemory.Teff | 0.685965 | 0.00013 | 0.092377 | |
UniRef90_R7CGS0: NO_NAME | activated.nonMemory.Teff | 0.73592 | 0.000135 | 0.092377 | |
UniRef90_R7CGX0: Nicotinate phosphoribosyltransferase | activated.nonMemory.Teff | 0.64437 | 0.000179 | 0.098154 | |
UniRef90_R7CGX6: NO_NAME | activated.nonMemory.Teff | 0.607018 | 0.00012 | 0.09182 | |
UniRef90_R7CH88: NO_NAME | activated.nonMemory.Teff | 0.697716 | 0.000174 | 0.098154 | |
UniRef90_R7CIC0: NO_NAME | activated.nonMemory.Teff | 0.666676 | 0.000155 | 0.095101 | |
UniRef90_R7CIF8: NO_NAME | activated.nonMemory.Teff | 0.64386 | 0.000128 | 0.092377 | |
UniRef90_R7CK52: NO_NAME | activated.nonMemory.Teff | 0.741653 | 0.000141 | 0.092467 | |
UniRef90_R7CLQ2: Cyclic pyranopterin monophosphate synthase accessory protein | activated.nonMemory.Teff | 0.674929 | 9.2E–05 | 0.080527 | |
UniRef90_R7CLX2: NO_NAME | activated.nonMemory.Teff | 0.655537 | 0.000181 | 0.098154 | |
UniRef90_R7CPD9: NO_NAME | activated.nonMemory.Teff | 0.652022 | 3.76E–05 | 0.048 | |
UniRef90_R7CPY8: NO_NAME | activated.nonMemory.Teff | 0.721193 | 0.000124 | 0.092377 | |
UniRef90_R7CR35: ATP synthase | activated.nonMemory.Teff | 0.698246 | 0.000102 | 0.082059 | |
UniRef90_R7CRE2: Acetylglutamate kinase | activated.nonMemory.Teff | 0.700709 | 0.00019 | 0.098154 | |
UniRef90_R7CSG7: NO_NAME | activated.nonMemory.Teff | 0.675439 | 8.46E–05 | 0.076379 | |
UniRef90_R7CSS1: NO_NAME | activated.nonMemory.Teff | 0.734623 | 0.000134 | 0.092377 | |
UniRef90_R7DCE8: NO_NAME | activated.nonMemory.Teff | 0.601055 | 5.27E–05 | 0.058851 | |
UniRef90_R7NEY7: Acetyltransferases | activated.nonMemory.Teff | 0.625457 | 1.66E–06 | 0.008485 | |
UniRef90_T5LV87: IS605 OrfB family transposase | activated.nonMemory.Teff | 0.624561 | 0.000135 | 0.092377 | |
UniRef90_T5M0M6: NO_NAME | activated.nonMemory.Teff | 0.711034 | 6.03E–05 | 0.062774 | |
UniRef90_E1YTP4: NO_NAME | activated.nonMemory.Teff | 0.790135 | 5.17E–07 | 0.003527 | 3 |
UniRef90_R7CII3: NO_NAME | activated.nonMemory.Teff | 0.670823 | 0.000184 | 0.098154 | |
UniRef90_R7CQN6: TrkA-N domain-containing protein | activated.nonMemory.Teff | 0.699664 | 0.000171 | 0.098154 | |
UniRef90_D4LQI2: Site-specific recombinases, DNA invertase Pin homologs | Teff_IL17_IL22 | 0.652583 | 2.91E–06 | 0.015436 | |
UniRef90_C6J953: NO_NAME | Teff_IL17_only | 0.671967 | 1.62E–06 | 0.011888 | |
UniRef90_C6JBL1: NO_NAME | Teff_IL17_only | 0.610238 | 4.71E–05 | 0.065888 | |
UniRef90_C6JEF2: NO_NAME | Teff_IL17_only | 0.62527 | 2.19E–05 | 0.047594 | |
UniRef90_D4LQI1: Site-specific recombinases, DNA invertase Pin homologs | Teff_IL17_only | 0.698422 | 4.94E–05 | 0.066521 | |
UniRef90_D4LQI2: Site-specific recombinases, DNA invertase Pin homologs | Teff_IL17_only | 0.627224 | 3.5E–06 | 0.016735 | |
UniRef90_E1YTP4: NO_NAME | Teff_IL17_only | 0.62082 | 6.42E–06 | 0.022067 | |
UniRef90_R5XAV3: Heavy-metal-associated domain | Teff_IL17_only | 0.62566 | 9.01E–07 | 0.008609 | |
UniRef90_R7CFY1: NO_NAME | Teff_IL17_only | 0.669696 | 2.91E–05 | 0.054164 | |
UniRef90_R7CHB7: Na+/H+ antiporter NhaC | Teff_IL17_only | 0.811625 | 1.33E–05 | 0.035418 | |
UniRef90_R7CII3: NO_NAME | Teff_IL17_only | 0.610643 | 0.000114 | 0.091508 | |
UniRef90_R7CMK6: NO_NAME | Teff_IL17_only | 0.637328 | 1.29E–07 | 0.002051 | |
UniRef90_R7CN26: NO_NAME | Teff_IL17_only | 0.666082 | 3.98E–06 | 0.017267 | |
UniRef90_R7CQN6: TrkA-N domain-containing protein | Teff_IL17_only | 0.61839 | 0.00011 | 0.090629 | |
UniRef90_A5ZNM4: NO_NAME | Teff_IL17_IL22 | 0.734266 | 5.1E–06 | 0.019503 | 4 |
UniRef90_A5ZYV3: NO_NAME | Teff_IL17_IL22 | 0.706294 | 3.54E–05 | 0.06035 | |
UniRef90_A5ZYV6: NO_NAME | Teff_IL17_IL22 | 0.686516 | 2.57E–06 | 0.015322 | |
UniRef90_C6JC21: NO_NAME | Teff_IL17_IL22 | 0.607808 | 6.47E–06 | 0.022067 | |
UniRef90_D4JAB3: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily | Teff_IL17_IL22 | 0.794387 | 0.000109 | 0.090629 | |
UniRef90_D4LKT7: 50S ribosomal protein L7/L12 | Teff_IL17_IL22 | 0.684624 | 0.000117 | 0.091508 | |
UniRef90_D4LRE4: Transcriptional regulator, BadM/Rrf2 family | Teff_IL17_IL22 | 0.666693 | 9.86E–05 | 0.086726 | |
UniRef90_D4LVZ1: Predicted transcriptional regulators | Teff_IL17_IL22 | 0.766035 | 8.23E–07 | 0.008609 | |
UniRef90_D4MTV2: Transcriptional regulator, MerR family | Teff_IL17_IL22 | 0.713542 | 5.75E–05 | 0.073251 | |
UniRef90_D4MUD3: Transcriptional regulator, MarR family | Teff_IL17_IL22 | 0.729829 | 1.16E–06 | 0.009737 | |
UniRef90_F7JEX2: NO_NAME | Teff_IL17_IL22 | 0.711285 | 3.92E–06 | 0.017267 | |
UniRef90_R5Z6G3: NO_NAME | Teff_IL17_IL22 | 0.678483 | 2.85E–06 | 0.015436 | |
UniRef90_R7CCT5: NO_NAME | Teff_IL17_IL22 | 0.678393 | 0.000148 | 0.099236 | |
UniRef90_D4MUD3: Transcriptional regulator, MarR family | Teff_IL17_only | 0.75747 | 8.66E–08 | 0.002044 | |
s__Bacteroides_thetaiotaomicron | CD300E | 0.640982 | 2.63E–05 | 0.02332 | 5 |
UniRef90_G2T376: NO_NAME | CXCL2 | 0.735024 | 1.52E–06 | 0.090737 | |
s__Bacteroides_thetaiotaomicron | CXCL3 | 0.704029 | 3.68E–06 | 0.007238 | |
UniRef90_G2T376: NO_NAME | CXCL3 | 0.699686 | 6.32E–07 | 0.045297 | |
UniRef90_G2T5J9: NO_NAME | CXCL3 | 0.727956 | 7.33E–07 | 0.0507 | |
UniRef90_G2T376: NO_NAME | LRFN5 | 0.657281 | 4.08E–07 | 0.040956 | |
s__Bacteroides_thetaiotaomicron | SOCS3 | 0.704029 | 8.85E–05 | 0.050575 | |
UniRef90_D4LVH8: KaiC | activated.memory.CD8 | 0.78459 | 0.000144 | 0.092467 | 6 |
UniRef90_R9JXY1: 50S ribosomal protein L33 | activated.nonMemory.Teff | 0.648507 | 0.000165 | 0.096324 | |
UniRef90_A7B829: NO_NAME | Active.Teff | 0.620145 | 0.000188 | 0.098154 | |
UniRef90_D4LVH8: KaiC | Active.Teff | 0.697716 | 0.000175 | 0.098154 | |
UniRef90_G2T5D0: NO_NAME | Active.Teff | 0.651408 | 0.000155 | 0.095101 | |
UniRef90_K1S8B5: Transcriptional regulator | Active.Teff | 0.739437 | 0.000158 | 0.09531 | |
UniRef90_R9JXY1: 50S ribosomal protein L33 | Active.Teff | 0.669014 | 0.00014 | 0.092467 | |
UniRef90_U2PAU4: NO_NAME | Active.Teff | 0.870181 | 5.14E–07 | 0.003527 | |
s__Barnesiella_intestinihominis | LL22NC03-23C6.12 | 0.651584 | 9.5E–05 | 0.052803 | 7 |
UniRef90_C7H7L9: ABC transporter, ATP-binding protein | LL22NC03-23C6.12 | 0.65273 | 2.34E–07 | 0.036053 | |
s__Barnesiella_intestinihominis | SERPINA9 | 0.747806 | 3.18E–05 | 0.026686 | |
s__Eubacterium_hallii | GSTA1 | 0.72028 | 0.000187 | 0.078443 | 8 |
UniRef90_E2ZGA1: NO_NAME | GSTA1 | ‒0.82312 | 1.06E–06 | 0.071004 | |
s__Eubacterium_ventriosum | Vd2T_TNFa_only | 0.797189 | 5.33E–05 | 0.006695 | 9 |
UniRef90_B0NZF6: NO_NAME | Vd2T_TNFa_only | 0.64675 | 0.000105 | 0.090542 | |
UniRef90_D4M5F3: dTDP-glucose pyrophosphorylase | memory.Teff | ‒0.88422 | 0.000101 | 0.082059 | 10 |
UniRef90_D4M5F3: dTDP-glucose pyrophosphorylase | nonMemory.Teff | 0.880707 | 5.17E–05 | 0.058792 | |
DZ_duration | CD8_IL17_IL22 | 0.654946 | 0.000478 | 0.040147 | 11 |
PWY-5104: L-isoleucine biosynthesis IV | DZ_duration | 0.736492 | 0.000281 | 0.068952 | |
UniRef90_B0G2Q7: NO_NAME | Treg_IL17_IL22 | 0.776803 | 7.01E–05 | 0.077728 | 12 |
UniRef90_D4J5V6: Site-specific recombinase XerD | Treg_IL17_IL22 | 0.693832 | 9.86E–05 | 0.086726 | |
UniRef90_A5ZSX2: NO_NAME | CD8_TNFa_IFNg | 0.907182 | 7.34E–05 | 0.077728 | 13 |
UniRef90_D4JAA1: Phage integrase family | CD8_TNFa_IFNg | 0.795496 | 6.81E–05 | 0.077728 | |
s__Parabacteroides_distasonis | IL17A | 0.649429 | 0.000219 | 0.085842 | 14 |
s__Parabacteroides_distasonis | LINC00939 | 0.751742 | 2.07E–05 | 0.020128 | |
s__Bacteroides_dorei | FOSB | 0.605649 | 4.51E–05 | 0.033931 | 15 |
s__Bacteroides_dorei | Treg_IL22_only | 0.643114 | 3.18E–05 | 0.004358 | |
Treg_INFg_only | RP11-301M17.1 | 0.650444 | 2.22E–06 | 0.009133 | 16 |
UniRef90_G2SYP7: NO_NAME | Teff_TNFa_only | 0.704243 | 5.65E–06 | 0.020765 | 17 |
UniRef90_C4Z763: GTP pyrophosphokinase | Teff_TNFa_INFg | 0.804196 | 0.000117 | 0.091508 | 18 |
PWY0-1297: superpathway of purine deoxyribonucleosides degradation | PASI | 0.713137 | 1.85E–05 | 0.018036 | 19 |
UniRef90_C0FPA9: BAAT/acyl-CoA thioester hydrolase C-terminal domain protein | nonMemory.CD8 | ‒0.87834 | 0.000123 | 0.092377 | 20 |
s__Alistipes_putredinis | CD55 | 0.881119 | 0.000117 | 0.059771 | 21 |
s__Dorea_formicigenerans | TRHDE | 0.895105 | 4.16E–05 | 0.032046 | 22 |
s__Coprococcus_comes | CCDC85A | ‒0.63398 | 0.000222 | 0.086043 | 23 |
s__Lachnospiraceae_bacterium_3_1_46FAA | UCA1 | 0.609458 | 0.000162 | 0.072164 | 24 |
THRESYN-PWY: super pathway of L-threonine biosynthesis | Treg_TNFa_IFNg | ‒0.85365 | 7.05E–06 | 0.016049 | 25 |
UniRef90_C7H2P0: NO_NAME | CD8_TNFa_only | 0.704029 | 8.19E–05 | 0.079819 | 26 |
s__Roseburia_inulinivorans | CD177 | ‒0.83916 | 1.39E–06 | 0.003509 | 27 |
PYRIDNUCSAL-PWY: NAD salvage pathway I | URAD | 0.882718 | 1.02E–07 | 0.005333 | 28 |
Significant associations in PSO2-associated network | |||||
BIOTIN-BIOSYNTHESIS-PWY: biotin biosynthesis I | CYP2B7P | 0.833333 | 2.98E–05 | 0.009035 | 1 |
FASYN-ELONG-PWY: fatty acid elongation -- saturated | CYP2B7P | 0.833333 | 1.4E–05 | 0.005053 | |
FASYN-INITIAL-PWY: super pathway of fatty acid biosynthesis initiation (E. coli) | CYP2B7P | 0.826362 | 2.64E–05 | 0.008035 | |
GLUDEG-I-PWY: GABA shunt | CYP2B7P | 0.714286 | 0.000278 | 0.074586 | |
PWY-5022: 4-aminobutanoate degradation V | CYP2B7P | 0.714286 | 0.000334 | 0.087365 | |
PWY-5971: palmitate biosynthesis II (bacteria and plants) | CYP2B7P | 0.833333 | 2.8E–05 | 0.008503 | |
PWY-6113: superpathway of mycolate biosynthesis | CYP2B7P | 0.833333 | 4.57E–05 | 0.013734 | |
PWY-6282: palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) | CYP2B7P | 0.833333 | 7.21E–05 | 0.021414 | |
PWY-6284: super pathway of unsaturated fatty acids biosynthesis (E. coli) | CYP2B7P | 0.833333 | 4.07E–05 | 0.012269 | |
PWY-6519: 8-amino-7-oxononanoate biosynthesis I | CYP2B7P | 0.833333 | 3.09E–05 | 0.009339 | |
PWY-7388: octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) | CYP2B7P | 0.833333 | 1.83E–05 | 0.006357 | |
PWY-7664: oleate biosynthesis IV (anaerobic) | CYP2B7P | 0.833333 | 1.18E–05 | 0.004438 | |
PWY0-862: (5Z)-dodec-5-enoate biosynthesis | CYP2B7P | 0.833333 | 2.54E–05 | 0.007747 | |
PWYG-321: mycolate biosynthesis | CYP2B7P | 0.833333 | 1.31E–05 | 0.004806 | |
BIOTIN-BIOSYNTHESIS-PWY: biotin biosynthesis I | STC1 | –0.7619 | 0.00013 | 0.03689 | |
FASYN-ELONG-PWY: fatty acid elongation -- saturated | STC1 | –0.7619 | 0.000173 | 0.047907 | |
FASYN-INITIAL-PWY: super pathway of fatty acid biosynthesis initiation (E. coli) | STC1 | –0.7545 | 0.000271 | 0.073002 | |
PWY-5971: palmitate biosynthesis II (bacteria and plants) | STC1 | ‒0.7619 | 0.000209 | 0.05735 | |
PWY-6113: super pathway of mycolate biosynthesis | STC1 | ‒0.7619 | 0.000287 | 0.076805 | |
PWY-6282: palmitoleate biosynthesis I (from (5Z)-dodec-5-enoate) | STC1 | ‒0.7619 | 0.00028 | 0.075069 | |
PWY-6284: super pathway of unsaturated fatty acids biosynthesis (E. coli) | STC1 | ‒0.7619 | 0.000347 | 0.090509 | |
PWY-6519: 8-amino-7-oxononanoate biosynthesis I | STC1 | ‒0.7619 | 0.0002 | 0.055236 | |
PWY-7388: octanoyl-[acyl-carrier protein] biosynthesis (mitochondria, yeast) | STC1 | ‒0.7619 | 0.00016 | 0.044499 | |
PWY-7664: oleate biosynthesis IV (anaerobic) | STC1 | ‒0.7619 | 0.000235 | 0.063921 | |
PWY0-862: (5Z)-dodec-5-enoate biosynthesis | STC1 | ‒0.7619 | 0.000229 | 0.062421 | |
PWYG-321: mycolate biosynthesis | STC1 | ‒0.7619 | 0.00012 | 0.0343 | |
s__Bacteroides_ovatus | Teff_TNFa_only | 0.666667 | 0.000994 | 0.091836 | 2 |
s__Bacteroides_ovatus | Vd2T_IL17_only | 0.761905 | 0.00021 | 0.043201 | |
UniRef90_C0FN95: NO_NAME | Vd2T_IL17_only | 0.880952 | 5.48E–07 | 0.026184 | |
UniRef90_D6E3G6: Site-specific recombinase XerD | Vd2T_IL17_only | 0.90368 | 1.25E–07 | 0.011927 | |
ANAEROFRUCAT-PWY: homolactic fermentation | FOS | ‒0.97619 | 0.000119 | 0.034027 | 3 |
GLYCOLYSIS: glycolysis I (from glucose 6-phosphate) | FOS | ‒0.95238 | 8.01E–05 | 0.023227 | |
PWY-5484: glycolysis II (from fructose 6-phosphate) | FOS | ‒0.95238 | 5.05E–05 | 0.015132 | |
ANAEROFRUCAT-PWY: homolactic fermentation | PDE4C | ‒0.90476 | 9.72E–05 | 0.028114 | |
ARGSYN-PWY: L-arginine biosynthesis I (via L-ornithine) | PASI | 0.754505 | 0.001298 | 0.055236 | 4 |
PENTOSE-P-PWY: pentose phosphate pathway | PASI | 0.833333 | 0.002607 | 0.055236 | |
PWY-5154: L-arginine biosynthesis III (via N-acetyl-L-citrulline) | PASI | 0.785714 | 0.001279 | 0.055236 | |
PWY-7400: L-arginine biosynthesis IV (archaebacteria) | PASI | 0.754505 | 0.001234 | 0.055236 | |
ARGSYN-PWY: L-arginine biosynthesis I (via L-ornithine) | XIST | ‒0.64672 | 7.14E–06 | 0.00271 | |
ARGSYNBSUB-PWY: L-arginine biosynthesis II (acetyl cycle) | XIST | ‒0.92857 | 4.15E–06 | 0.001618 | |
GLUTORN-PWY: L-ornithine biosynthesis | XIST | ‒0.6627 | 2.01E–07 | 9.8E–05 | |
PWY-5154: L-arginine biosynthesis III (via N-acetyl-L-citrulline) | XIST | ‒0.63474 | 1.07E–05 | 0.004031 | |
PWY-7400: L-arginine biosynthesis IV (archaebacteria) | XIST | ‒0.62655 | 1.07E–05 | 0.004046 | |
PWY-6121: 5-aminoimidazole ribonucleotide biosynthesis I | BMX | ‒0.95238 | 0.000205 | 0.056554 | 5 |
PWY-6122: 5-aminoimidazole ribonucleotide biosynthesis II | BMX | ‒0.97619 | 0.000225 | 0.061454 | |
PWY-6277: super pathway of 5-aminoimidazole ribonucleotide biosynthesis | BMX | ‒0.97619 | 0.000225 | 0.061454 | |
PWY-6121: 5-aminoimidazole ribonucleotide biosynthesis I | CCDC129 | ‒0.88095 | 0.000105 | 0.030152 | |
PWY-6122: 5-aminoimidazole ribonucleotide biosynthesis II | CCDC129 | ‒0.90476 | 0.000107 | 0.030556 | |
PWY-6277: superpathway of 5-aminoimidazole ribonucleotide biosynthesis | CCDC129 | ‒0.90476 | 0.000107 | 0.030556 | |
PWY-6121: 5-aminoimidazole ribonucleotide biosynthesis I | SH2D6 | ‒0.97619 | 2.49E–05 | 0.007595 | |
PWY-6122: 5-aminoimidazole ribonucleotide biosynthesis II | SH2D6 | ‒0.95238 | 7.94E–05 | 0.023078 | |
PWY-6277: superpathway of 5-aminoimidazole ribonucleotide biosynthesis | SH2D6 | ‒0.95238 | 7.94E–05 | 0.023078 | |
PWY-6121: 5-aminoimidazole ribonucleotide biosynthesis I | SH2D7 | ‒0.95238 | 0.000325 | 0.085378 | |
PWY-6122: 5-aminoimidazole ribonucleotide biosynthesis II | SH2D7 | ‒0.97619 | 0.000326 | 0.08554 | |
PWY-6277: super pathway of 5-aminoimidazole ribonucleotide biosynthesis | SH2D7 | ‒0.97619 | 0.000326 | 0.08554 | |
P461-PWY: hexitol fermentation to lactate, formate, ethanol and acetate | MT1X | ‒0.85714 | 7.8E–05 | 0.022737 | 6 |
P461-PWY: hexitol fermentation to lactate, formate, ethanol, and acetate | MYBL1 | ‒0.90476 | 0.000309 | 0.081754 | |
P461-PWY: hexitol fermentation to lactate, formate, ethanol, and acetate | NTRK2 | ‒0.95238 | 0.000321 | 0.084551 | |
s__Clostridium_bartlettii | IL17F | 0.76835 | 0.000202 | 0.059482 | 7 |
s__Veillonella_unclassified | IL17F | 0.76835 | 2.91E–05 | 0.011329 | |
s__Clostridium_bartlettii | RN7SL301P | 0.76835 | 0.00012 | 0.038644 | |
s__Veillonella_unclassified | RN7SL301P | 0.76835 | 7.23E–05 | 0.025955 | |
s__Eggerthella_lenta | Vd2 | 0.89822 | 0.000353 | 0.054394 | 8 |
s__Flavonifractor_plautii | Vd2 | 0.785714 | 0.000613 | 0.072663 | |
s__Eggerthella_lenta | RP11-707O23.5 | 0.76835 | 1.96E–06 | 0.001075 | |
s__Flavonifractor_plautii | RP11-707O23.5 | 0.763763 | 0.000134 | 0.04259 | |
s__Eubacterium_siraeum | Vd2T_IL22_only | 0.814386 | 0.000264 | 0.048712 | 9 |
s__Eubacterium_siraeum | IL17C | 0.76835 | 7.73E–06 | 0.003364 | |
s__Subdoligranulum_unclassified | IRX2 | 0.754505 | 0.000291 | 0.083959 | 10 |
s__Subdoligranulum_unclassified | PAX8-AS1 | ‒0.83333 | 0.000316 | 0.087851 | |
s__Roseburia_hominis | C5orf17 | 0.904762 | 0.000139 | 0.043995 | 11 |
s__Roseburia_hominis | RP11-726G1.1 | 0.904762 | 0.000122 | 0.038958 | |
GALACTUROCAT-PWY: D-galacturonate degradation I | GHR | 0.928571 | 0.000275 | 0.073927 | 12 |
PWY-6507: 4-deoxy-L-threo-hex-4-enopyranuronate degradation | GHR | 0.97619 | 5.83E–05 | 0.017377 | |
CITRULBIO-PWY: L-citrulline biosynthesis | PCK1 | 0.904762 | 0.00033 | 0.086443 | 13 |
PWY-4984: urea cycle | PCK1 | 0.904762 | 0.000355 | 0.092057 | |
PWY-6305: putrescine biosynthesis IV | CXCL8 | 0.97619 | 0.000123 | 0.034844 | 14 |
PWY-6305: putrescine biosynthesis IV | IGHV4-31 | 0.928571 | 0.000159 | 0.044272 | |
FAO-PWY: fatty acid β-oxidation I | IGKV1D-16 | 0.946125 | 0.000305 | 0.080971 | 15 |
PWY-5136: fatty acid β-oxidation II (peroxisome) | IGKV1D-16 | 0.952381 | 7.44E–05 | 0.022051 | |
P42-PWY: incomplete reductive TCA cycle | IGLV7-46 | ‒0.97619 | 0.000353 | 0.091828 | 16 |
PWY-5104: L-isoleucine biosynthesis IV | IGLV7-46 | ‒0.95238 | 0.000101 | 0.029049 | |
s__Lachnospiraceae_bacterium_1_4_56FAA | CD8_IL22_only | 0.809524 | 0.000137 | 0.036152 | 17 |
s__Lachnospiraceae_bacterium_1_4_56FAA | Teff_TNFa_INFg | 0.718576 | 6.25E–05 | 0.020997 | |
PWY-5189: tetrapyrrole biosynthesis II (from glycine) | CA1 | ‒0.78571 | 0.000311 | 0.082075 | 18 |
PWY-5189: tetrapyrrole biosynthesis II (from glycine) | CD274 | 0.928571 | 0.000299 | 0.079439 | |
FOLSYN-PWY: super pathway of tetrahydrofolate biosynthesis and salvage | TMEM37 | 0.934148 | 3.07E–06 | 0.001317 | 19 |
PWY-6612: superpathway of tetrahydrofolate biosynthesis | TMEM37 | 0.904762 | 4.47E–06 | 0.001739 | |
Treg_IL17_only | FCRL1 | ‒0.97619 | 6.99E–05 | 0.041248 | 20 |
Treg_IL17_only | FCRLA | ‒1 | 0.000158 | 0.087172 | |
PWY-6969: TCA cycle V (2-oxoglutarate:ferredoxin oxidoreductase) | REG1A | ‒0.76376 | 0.000365 | 0.094544 | 21 |
s__Bacteroides_xylanisolvens | REG1A | 0.736989 | 0.000162 | 0.048778 | |
GLCMANNANAUT-PWY: super pathway of N-acetylglucosamine, N-acetylmannosamine, and N-acetylneuraminate degradation | C11orf86 | ‒0.83333 | 5.42E–06 | 0.002104 | 22 |
GLUCONEO-PWY: gluconeogenesis I | IGLV3-10 | ‒0.7619 | 0.000271 | 0.073002 | 23 |
s__Ruminococcus_bromii | IGHM | 0.904762 | 1.28E–05 | 0.005526 | 24 |
PWY-621: sucrose degradation III (sucrose invertase) | CLCA4 | ‒0.97619 | 1.29E–05 | 0.00476 | 25 |
PWY-2941: L-lysine biosynthesis II | NLGN4Y | 0.912328 | 0.000273 | 0.073524 | 26 |
PHOSLIPSYN-PWY: super pathway of phospholipid biosynthesis I (bacteria) | IGLV5-37 | ‒0.90476 | 0.000222 | 0.060934 | 27 |
UniRef90_B0GA46: NO_NAME | CD8_TNFa_IFNg | 0.8485 | 2.77E–06 | 0.088269 | 28 |
TRNA-CHARGING-PWY: tRNA charging | CHIT1 | ‒0.92857 | 1.07E–05 | 0.004046 | 29 |
RHAMCAT-PWY: L-rhamnose degradation I | DZ_duration | 0.886243 | 0.00443 | 0.078996 | 30 |
s__Clostridium_bolteae | Active.Teff | ‒0.87427 | 0.000195 | 0.092483 | 31 |
PWY0-1297: superpathway of purine deoxyribonucleosides degradation | MYEOV | 0.904762 | 3.78E–05 | 0.011407 | 32 |
NONOXIPENT-PWY: pentose phosphate pathway (non-oxidative branch) | CLIC6 | 0.904762 | 0.000182 | 0.050256 | 33 |
PWY-3001: super pathway of L-isoleucine biosynthesis I | CIDEC | ‒0.88095 | 0.000207 | 0.056999 | 34 |
s__Bilophila_wadsworthia | NLRP2 | ‒0.95238 | 4.72E–05 | 0.018207 | 35 |
PWY-5005: biotin biosynthesis II | KRT8P36 | 0.922172 | 0.000142 | 0.040129 | 36 |
PWY0-1061: superpathway of L-alanine biosynthesis | RP11-575F12.2 | 0.970077 | 0.000254 | 0.068804 | 37 |
PWY0-1296: purine ribonucleosides degradation | SULT1C2 | ‒0.97619 | 0.000106 | 0.030556 | 38 |
MET-SAM-PWY: super pathway of S-adenosyl-L-methionine biosynthesis | FRMD1 | ‒0.80952 | 0.000175 | 0.048401 | 39 |
LACTOSECAT-PWY: lactose and galactose degradation I | IGHV1-3 | 0.952381 | 0.000237 | 0.064542 | 40 |
s__Bilophila_unclassified | RPS6KA2-AS1 | ‒1 | 1.82E–05 | 0.007734 | 41 |
PWY-7383: anaerobic energy metabolism (invertebrates, cytosol) | IGLV4-60 | ‒0.92857 | 0.000302 | 0.080129 | 42 |
HEME-BIOSYNTHESIS-II: heme biosynthesis I (aerobic) | RP11-958N24.2 | 0.788009 | 0.000292 | 0.077896 | 43 |
PWY-7234: inosine-5-phosphate biosynthesis III | HERC2P4 | ‒0.92857 | 0.000167 | 0.0464 | 44 |
PWY0-162: super pathway of pyrimidine ribonucleotides de novo biosynthesis | ARL14 | ‒0.97008 | 6.97E–05 | 0.020733 | 45 |
PWY-7229: superpathway of adenosine nucleotides de novo biosynthesis I | CTAGE15 | 0.857143 | 0.000298 | 0.079314 | 46 |
Vd2T_IFNg_only | IGLC7 | 0.880952 | 0.000167 | 0.08878 | 47 |
PWY-6897: thiamin salvage II | MME-AS1 | 0.76835 | 0.000346 | 0.09024 | 48 |
PWY-5030: L-histidine degradation III | AC131056.3 | 0.952381 | 0.000379 | 0.097971 | 49 |
s__Eubacterium_eligens | RP11-259G18.3 | ‒0.95181 | 6.08E–05 | 0.022759 | 50 |
Treg_IL17_IL22 | IGKV1D-43 | 0.730552 | 6.75E–05 | 0.041248 | 51 |
s__Lachnospiraceae_bacterium_7_1_58FAA | ZBTB16 | 0.928571 | 0.000347 | 0.095663 | 52 |
s__Coprococcus_catus | THNSL2 | 1 | 5.97E–05 | 0.02245 | 53 |
s__Erysipelotrichaceae_bacterium_6_1_45 | PTGS2 | ‒0.83333 | 0.000359 | 0.098475 | 54 |
s__Bifidobacterium_longum | Vd2T_TNFa_only | ‒0.91573 | 0.000601 | 0.072663 | 55 |
List of significant associations in PSO3 associated network | |||||
P122-PWY: heterolactic fermentation | EDDM3DP | 0.664211 | 1.49E–05 | 0.022213 | 1 |
P122-PWY: heterolactic fermentation | RP11-100G15.10 | 0.664211 | 1.49E–05 | 0.022213 | |
PWY-5083: NAD/NADH phosphorylation and dephosphorylation | EDDM3DP | 0.695608 | 4.42E–07 | 0.001001 | |
PWY-5083: NAD/NADH phosphorylation and dephosphorylation | RP11-100G15.10 | 0.695608 | 4.42E–07 | 0.001001 | |
PWY-821: super pathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae) | RP11-100G15.10 | 0.695608 | 7.39E–05 | 0.070103 | |
PWY-821: super pathway of sulfur amino acid biosynthesis (Saccharomyces cerevisiae) | EDDM3DP | 0.695608 | 7.39E–05 | 0.070103 | |
PWY0-1061: superpathway of L-alanine biosynthesis | RP11-100G15.10 | 0.654654 | 9.11E–05 | 0.081919 | |
PWY0-1061: superpathway of L-alanine biosynthesis | EDDM3DP | 0.654654 | 9.11E–05 | 0.081919 | |
s__Bacteroides_xylanisolvens | EDDM3DP | 0.654654 | 0.000129 | 0.063831 | |
s__Bacteroides_xylanisolvens | RP11-100G15.10 | 0.654654 | 0.000129 | 0.063831 | |
s__Haemophilus_parainfluenzae | EDDM3DP | 0.654654 | 3.59E–07 | 0.000407 | |
s__Haemophilus_parainfluenzae | RP11-100G15.10 | 0.654654 | 3.59E–07 | 0.000407 | |
PWY-5188: tetrapyrrole biosynthesis I (from glutamate) | MYBL1 | ‒1 | 1.56E–05 | 0.022439 | 2 |
PWY-5188: tetrapyrrole biosynthesis I (from glutamate) | PAX5 | ‒1 | 4.29E–05 | 0.046051 | |
PWY-5188: tetrapyrrole biosynthesis I (from glutamate) | AFF2 | ‒1 | 1.32E–05 | 0.020625 | |
PWY-5188: tetrapyrrole biosynthesis I (from glutamate) | TCL1A | ‒0.88571 | 1.28E–05 | 0.020213 | |
PWY-5188: tetrapyrrole biosynthesis I (from glutamate) | CD79B | ‒0.88571 | 3.53E–05 | 0.040084 | |
PWY-5345: superpathway of L-methionine biosynthesis (by sulfhydrylation) | PWP2 | ‒0.94286 | 1.25E–05 | 0.019878 | 3 |
PWY-5345: super pathway of L-methionine biosynthesis (by sulfhydrylation) | IGKV1-9 | ‒0.94286 | 8.57E–05 | 0.078976 | |
SULFATE-CYS-PWY: super pathway of sulfate assimilation and cysteine biosynthesis | IGKV1-9 | ‒0.89865 | 8.22E–05 | 0.076628 | |
COBALSYN-PWY: adenosylcobalamin salvage from cobinamide I | ATP13A5 | ‒1 | 8.76E–05 | 0.079978 | 4 |
DTDPRHAMSYN-PWY: dTDP-L-rhamnose biosynthesis I | ATP13A5 | ‒1 | 3.25E–05 | 0.037635 | |
DTDPRHAMSYN-PWY: dTDP-L-rhamnose biosynthesis I | RGS13 | ‒0.94286 | 6.46E–05 | 0.063204 | |
s__Roseburia_intestinalis | IL36RN | 0.845154 | 7.21E–05 | 0.042737 | 5 |
s__Roseburia_intestinalis | SLC44A5 | 0.771429 | 0.000123 | 0.061427 | |
s__Roseburia_intestinalis | RP11-313J2.1 | ‒0.82857 | 6.98E–05 | 0.041714 | |
s__Lachnospiraceae_bacterium_7_1_58FAA | RP11-462B18.1 | 0.654654 | 0.000174 | 0.083495 | 6 |
s__Lachnospiraceae_bacterium_7_1_58FAA | TM4SF4 | 0.885714 | 3.85E–05 | 0.024936 | |
s__Lachnospiraceae_bacterium_7_1_58FAA | IGHV3-66 | ‒1 | 6.57E–06 | 0.005182 | |
GOLPDLCAT-PWY: superpathway of glycerol degradation to 1,3-propanediol | NARF | ‒1 | 0.000113 | 0.097624 | 7 |
GOLPDLCAT-PWY: superpathway of glycerol degradation to 1,3-propanediol | PNLIPRP2 | ‒1 | 4.67E–05 | 0.04818 | |
MET-SAM-PWY: superpathway of S-adenosyl-L-methionine biosynthesis | TMEM150B (DRAM-3 regulate autophagy) | 1 | 3.53E–05 | 0.040084 | 8 |
PWY-5347: superpathway of L-methionine biosynthesis (transsulfuration) | TMEM150B | 1 | 8.06E–05 | 0.075717 | |
FAO-PWY: fatty acid β-oxidation I | TEKT4P2 | ‒1 | 2.74E–05 | 0.035602 | 9 |
PWY-5136: fatty acid β-oxidation II (peroxisome) | TEKT4P2 | ‒1 | 3.71E–05 | 0.040923 | |
UniRef90_A7B4W0: NO_NAME | AQP5 | 0.970588 | 4.31E–07 | 0.015343 | 10 |
UniRef90_D6DY27: ABC-type antimicrobial peptide transport system, ATPase component | AQP5 | 0.955882 | 1.67E–06 | 0.057497 | |
UniRef90_C6JCY5: NO_NAME | IGLV4-60 | ‒0.98561 | 2.08E–06 | 0.070312 | 11 |
NAD-BIOSYNTHESIS-II: NAD salvage pathway II | NLGN4Y | 0.941124 | 7.1E–05 | 0.068116 | 12 |
CALVIN-PWY: Calvin-Benson-Bassham cycle | HBEGF | 1 | 7.11E–05 | 0.068116 | 13 |
GLUCONEO-PWY: gluconeogenesis I | RP11-575F12.3 | 1 | 7.47E–06 | 0.013124 | 14 |
PWY-5097: L-lysine biosynthesis VI | RP11-30P6.6 | ‒1 | 4.54E–05 | 0.047844 | 15 |
PYRIDNUCSYN-PWY: NAD biosynthesis I (from aspartate) | RP11-747H7.3 | 1 | 5.69E–05 | 0.055963 | 16 |
UniRef90_G1WWG9: NO_NAME | CD55 | 1 | 2.77E–06 | 0.090568 | 17 |
PWY-5005: biotin biosynthesis II | TDRD1 | 0.941124 | 8.24E–05 | 0.076628 | 18 |
OANTIGEN-PWY: O-antigen building blocks biosynthesis (E. coli) | ISG15 | 1 | 4.61E–05 | 0.048107 | 19 |
UniRef90_D4L1Y1: Site-specific recombinases, DNA invertase Pin homologs | SERPINA9 | ‒1 | 1.8E–08 | 0.000665 | 20 |
PWY-2941: L-lysine biosynthesis II | PI15 | 0.828571 | 4.83E–05 | 0.049266 | 21 |
PWY4LZ-257: superpathway of fermentation (Chlamydomonas reinhardtii) | IGLC7 | ‒0.94286 | 8.84E–05 | 0.080307 | 22 |
UniRef90_D4KBZ1: Ribonuclease H | HRCT1 | ‒1 | 2.95E–06 | 0.094916 | 23 |
UniRef90_C7H3L3: NO_NAME | FOSB | ‒0.95618 | 1.65E–06 | 0.057497 | 24 |
CRNFORCAT-PWY: creatinine degradation I | VWA5B1 | 1 | 5.56E–06 | 0.010772 | 25 |
s__Anaerostipes_hadrus | RP11-424G14.1 | 0.845154 | 2.53E–07 | 0.000295 | 26 |
Abbreviations: adj, adjusted; Cor, correlation value.