Supplementary Table S6.
List of Microbial Gene Families that Are Differentially Abundant between Different Subgroups in the Cohort
| UniRef90_Genefamilies | Base Mean | Log2 Fold Change | P-Value | Padj | Comparison Pair |
|---|---|---|---|---|---|
| UniRef90_R5F5T8: NO_NAME | 6.13241864 | 3.855214514 | 8.38E–09 | 9.43E–06 | c2c3 |
| UniRef90_R5F5U3: NO_NAME | 7.146133182 | 3.742380578 | 6.57E–09 | 7.87E–06 | c2c3 |
| UniRef90_R5F5U7: NO_NAME | 5.872476462 | 3.736858351 | 3.22E–09 | 5.40E–06 | c2c3 |
| UniRef90_R5F5V1: NO_NAME | 6.214726081 | 3.729014981 | 1.70E–07 | 8.76E–05 | c2c3 |
| UniRef90_R5F5V6: NO_NAME | 6.843317692 | 3.810172235 | 7.23E–08 | 4.24E–05 | c2c3 |
| UniRef90_R5F6I7: NO_NAME | 5.66902435 | 3.508892329 | 1.28E–08 | 1.30E–05 | c2c3 |
| UniRef90_R5F7E6: NO_NAME | 7.654869731 | 3.781212969 | 8.36E–08 | 4.80E–05 | c2c3 |
| UniRef90_R5F7E9: NO_NAME | 6.014946714 | 3.700272305 | 1.07E–07 | 5.95E–05 | c2c3 |
| UniRef90_R5F7F4: NO_NAME | 6.252090198 | 3.70429003 | 2.70E–09 | 4.97E–06 | c2c3 |
| UniRef90_R5F7F6: NO_NAME | 7.03037544 | 3.73575232 | 6.86E–08 | 4.14E–05 | c2c3 |
| UniRef90_R5F826: NO_NAME | 6.25853359 | 3.553654489 | 5.32E–06 | 0.002125 | c2c3 |
| UniRef90_R5F830: NO_NAME | 4.020772359 | 3.303446928 | 0.000126 | 0.041501 | c2c3 |
| UniRef90_R6BXA1: Pyridoxal biosynthesis lyase PdxS | 18.20827345 | –4.738434723 | 0.000139 | 0.025007 | c2c1 |
| UniRef90_R6EYN1: Phosphoenolpyruvate carboxykinase [ATP] | 12.14532041 | ‒5.300791062 | 0.000284 | 0.045255 | c2c1 |
| UniRef90_R5UHP6: NO_NAME | 7.404456209 | –2.502048554 | 0.000151 | 0.048523 | c2c3 |
| UniRef90_R5V1S5: NO_NAME | 6.469822898 | 3.674332424 | 3.90E–08 | 2.69E–05 | c2c3 |
| UniRef90_R5VEH7: NO_NAME | 5.638179874 | 3.783296451 | 3.44E–08 | 2.46E–05 | c2c3 |
| UniRef90_R5VN00: NO_NAME | 6.66944193 | 3.804730154 | 9.58E–10 | 2.11E–06 | c2c3 |
| UniRef90_R6FSV7: dTDP-4-dehydrorhamnose 3 5-epimerase | 3.836852934 | ‒4.712602303 | 0.00015 | 0.026547 | c2c1 |
| UniRef90_UPI00046F6872: NO_NAME | 3.841073774 | ‒3.288653597 | 7.37E–05 | 0.025081 | c2c3 |
| UniRef90_R6YLJ5: dTDP-glucose 4 6-dehydratase | 25.36463194 | ‒5.501203549 | 4.07E–05 | 0.008208 | c2c1 |
| UniRef90_R6YTB4: Virulence protein | 6.475252167 | 3.598839048 | 1.42E–11 | 5.13E–08 | c3c1 |
| UniRef90_R7ERI0: Protein phosphatase 2C | 3.917056058 | 2.488315558 | 0.000229 | 0.03792 | c2c1 |
| UniRef90_W1I1K8: Uncultured bacterium extrachromosomal DNA RGI00018 | 44.18955643 | ‒8.421153783 | 7.98E–05 | 0.027004 | c2c3 |
| UniRef90_W1I4A6: Uncultured bacterium extrachromosomal DNA RGI00018 | 19.44468222 | ‒5.622500646 | 0.000293 | 0.046458 | c2c1 |
Abbreviation: adj, adjusted.