Table 7.
Replicon sequence types of Inc F of E. coli (n = 26) and Salmonella (n = 3)
| Species | Strain name | Regionsa | Provincesb | Sources | Year | Resistance genes | Allele number for replicon | FAB formulad | ||
|---|---|---|---|---|---|---|---|---|---|---|
| FII, FIIsc | FIA | FIB | ||||||||
| E. coli | CREM 10 | N | CRI | Pork | 2016–2017 | blaCTX-M, blaTEM | F46 | – | – | F46:A-:B- |
| CRES 14 | N | CRI | Pig | 2016–2017 | blaCTX-M, blaTEM | F46 | – | – | F46:A-:B- | |
| CRES 7 | N | CRI | Pig | 2016–2017 | mcr1 | F46 | – | B20 | F46:A-:B20 | |
| FpCa1 | W | RBR | Pig | 2015 | blaCTX-M, blaTEM, mcr1 | F46 | – | B20 | F46:A-:B20 | |
| FpEa24 | W | RBR | Pig | 2016–2017 | blaCTX-M, blaTEM, mcr1 | F46 | – | B20 | F46:A-:B20 | |
| NK 253 | NE | NKI | Human | 2013–2014 | blaCTX-M | F46 | – | B20 | F46:A-:B20 | |
| CRES 20 | N | CRI | Pig | 2016–2017 | mcr3 | F18 | – | B1 | F18:A-:B1 | |
| MH 95 | NE | MDH | Pork | 2013–2014 | blaCTX-M, blaTEM | F18 | – | B1 | F18:A-:B1 | |
| SaEM 37 | E | SKW | Pork | 2016–2017 | mcr1 | F18 | – | B1 | F18:A-:B1 | |
| E405 | NE | NMA | Pig | 2007–2008 | blaCTX-M, blaTEM, mcr3 | F2 | – | – | F2:A-:B- | |
| MH 70 | NE | MDH | Human | 2013–2014 | blaCTX-M | F2 | – | – | F2:A-:B- | |
| SaEM 19 | E | SKW | Pork | 2016–2017 | blaCTX-M, blaTEM | F2 | – | – | F2:A-:B- | |
| SaEM 29 | E | SKW | Pork | 2016–2017 | blaCTX-M | F2 | – | – | F2:A-:B- | |
| SaES 22 | E | SKW | Pig | 2016–2017 | blaCTX-M, blaTEM, mcr3 | F2 | – | – | F2:A-:B- | |
| NK 261 | NE | NKI | Human | 2013–2014 | blaCTX-M, blaTEM | F2 | – | – | F2:A-:B- | |
| NK 262 | NE | NKI | Human | 2013–2014 | blaCTX-M, blaTEM | F2 | – | – | F2:A-:B- | |
| E431 | W | RBR | Pig | 2007–2008 | mcr2, mcr3 | F2 | – | B40 | F2:A-:B40 | |
| MH 227 | NE | MDH | Human | 2013–2014 | blaCTX-M | F29 | – | B10 | F29:A-:B10 | |
| NK 276 | NE | NKI | Human | 2013–2014 | blaCTX-M | F46 | – | B24 | F46:A-:B24 | |
| PLCa 7 | NE | NMA | Pig | 2015 | blaCTX-M, blaTEM, mcr1 | F2 | – | B20 | F2:A-:B20 | |
| PLEa 14 | NE | NMA | Pig | 2015 | blaCTX-M, blaTEM, mcr1 | F100 | – | B13 | F100:A-:B13 | |
| SaES 46 | E | SKW | Pig | 2016–2017 | mcr1 | F18 | A5, A6e | B1 | F18:A5,6:B1 | |
| NK 267 | NE | NKI | Human | 2013–2014 | blaTEM | – | A1, A6e | B1 | F-:A1,6:B1 | |
| CREM 48 | N | CRI | Pork | 2016–2017 | blaCTX-M, blaTEM | – | – | B24 | F-:A-:B24 | |
| SaEM 15 | E | SKW | Pork | 2016–2017 | blaCTX-M, blaTEM | – | – | B24 | F-:A-:B24 | |
| SaEM 57 | E | SKW | Pork | 2016–2017 | blaCTX-M, blaTEM | – | – | B24 | F-:A-:B24 | |
| S. weltevreden | MH 178.1 | NE | MDH | Pork | 2013–2014 | blaCTX-M14 | S1 | – | – | S1:A-:B- |
| S. yalding | NSM 11.3 | NE | NKI | Pork | 2016–2017 | mcr1 | S1 | – | – | S1:A-:B- |
| S. anatum | CRSS 28.1 | N | CRI | Pig | 2016–2017 | blaCTX-M, blaTEM, mcr3 | F2 | – | – | F2:A-:B- |
a
N, Northern; NE, North-eastern; W, West; E, East.
b
CRI, Chiangrai; RBR, Ratchaburi; NKI, Nongkhai; MDH, Mukdaharn; SKW, Sakaew; NMA, Nakornratchsrima.
c
Both sequences of FII and FIIs were identified to be allele F.
d
FAB formula was the combination of the sequence type of FII or FIIs:FIA:FIB.
e
Exactly matched to more than one reference.