Overview on physicochemical properties as well as BRAFV600E degradation potencies of a PLX4032-based PROTAC and paradox-breaking PROTACs 25 and 26.
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Cmpd | R1 | R2 | X | TPSAa | elog Db | %PPBc | D BRAF d |
SJF-0628 |
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H | CH | 247 | 2.9 | 96% | 46% |
25 (CST905) |
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H | CH | 250 | 3.2 | 96% | 52% |
26 |
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Me | N | 276 | 3.2 | 96% | >95% |
Topological polar surface area given in Å2.
Experimental distribution coefficient at pH 7.4.23
Protein binding values were estimated by an HPLC-based method.24
Degradation indicated as remaining BRAFV600E levels after 4 h treatment with 1 μM of each compound (as determined by densitometric analysis of Western blot assays).