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. 2022 Jun 15;2022:1904874. doi: 10.1155/2022/1904874

Table 2.

Potential interaction research and docking score of dock conformations towards Jack bean urease.

S. no. Docking scores Ligand Receptor Interaction Distance E (kcal/mol)
1 −10.825 C 30 SG CME 592 (A) H-donor 3.12 −0.2
C 32 O GLN 635 (A) H-donor 3.67 −0.1
C 34 SG CME 592 (A) H-donor 3.11 −0.2
C 36 O ARG 439 (A) H-donor 2.81 −0.1
N 45 O ALA 436 (A) H-donor 2.86 −2.9
N 40 CB ARG 439 (A) H-acceptor 3.21 −0.3
N 40 CB ALA 440 (A) H-acceptor 3.95 −0.1
NI 902 OQ2 KCX 490 (A) Metal 1.99 −6.3
NI 902 ND1 HIS 519 (A) Metal 2.14 −4.5
NI 902 OQ1 KCX 490 (A) Ionic 3.39 −2.3
NI 902 OQ2 KCX 490 (A) Ionic 1.99 −16.4
5-Ring NH2 ARG 439 (A) Pi-cation 3.91 −0.6
5-Ring CB ALA 440 (A) Pi-H 3.82 −0.2
2 −8.9541 C 22 O ALA 636 (A) H-donor 3.5 −0.1
O 1 NH1 ARG 609 (A) H-acceptor 3.77 −0.6
O 32 CA HIS 593 (A) H-acceptor 4.3 −0.1
6-Ring 5-Ring HIS 593 (A) Pi-Pi 3.94 0
3 −13.1927 O 16 CA ALA 440 (A) H-acceptor 3.49 −0.5
O 16 CB ALA 636 (A) H-acceptor 4.03 −0.2
O 30 NH2 ARG 439 (A) H-acceptor 3.09 −3.7
O 44 NH2 ARG 609 (A) H-acceptor 3.13 −2.5
C 24 5-Ring HIS 593 (A) H-Pi 3.89 −0.1
C 45 5-Ring HIS 593 (A) H-Pi 4.33 −0.1
6-ring 5-Ring HIS 593 (A) Pi-Pi 3.95 0
4 −11.2329 C 29 O ARG 439 (A) H-donor 3.86 −0.1
O 20 NH2 ARG 439 (A) H-acceptor 2.87 −5.8
O 35 NE2 HIS 492 (A) H-acceptor 3 −1.7
O 35 CE1 HIS 519 (A) H-acceptor 2.88 −0.1
O 35 NI NI 902 (A) Metal 2.71 −1.7
NI 902 OQ2 KCX 490 (A) Metal 1.99 −6.3
NI 902 ND1 HIS 519 (A) Metal 2.14 −4.5
NI 901 OQ1 KCX 490 (A) Metal 2.08 −5.2
NI 901 OD1 ASP 633 (A) Metal 2.12 −4.2
NI 901 OQ2 KCX 490 (A) Ionic 3.39 −2.4
NI 901 OD1 ASP 633 (A) Ionic 2.12 −14.1
6-Ring CZ CME 592 (A) Pi-H 3.73 −0.3