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. 2022 Jun 15;606(7915):718–724. doi: 10.1038/s41586-022-04800-3

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© The Author(s) 2022

Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.

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Extended Data Fig. 5 — Full length maximum likelihood phylogenetic tree using 1,000 bootstrap iterations for estimating node support and visualised using FigTree v1.4.4. The tree is constructed with 203 modern and 48 historical Y. pestis genomes, and is based on 2,960 SNPs (96% partial deletion). Scale denotes the number of substitutions per genomic site.