Table 4.
Nuclear genome SNPs and signatures of recombination within each of the four clades of C. auris.
| Clade I | Clade II | Clade III | Clade IV | |
|---|---|---|---|---|
| Reference nuclear genome size (×10^6 bp) | 12.37 | 12.25 | 12.74 | 12.43 |
| Sample size | 537 | 24 | 514 | 210 |
| Number of SNP sites | 4,775 | 3,456 | 3,038 | 1,427 |
| Total number of analyzed SNP pairs | 11,397,925 | 5,970,240 | 4,613,203 | 1,017,451 |
| SNP pairs in PI (% of total pairs) | 94,327 (0.83%) | 19,836 (0.33%) | 4,496 (0.097%) | 13,853 (1.36%) |
| SNP pairs in PI that fail to reject LE (% of total pairs that are in PI) | 73,529 (77.95%) | 19,836 (100%) | 3,961 (88.10%) | 11,237 (81.11%) |