TABLE 1.
Additional details on sequencing runs.
# | Objective* | Total samples | Library quantity (ng) | Total mapped reads | Median depth 30 coverage (%) |
1 | Adaptation | 12 | 50 | 32,293 | 3 |
2 | Adaptation | 8 | 38 | 39,530 | 36 |
3 | Adaptation | 12 | 122 | 295,224 | 85 |
4 | Adaptation and prospective | 10 | 346 | 288,608 | 94 |
5 | Retrospective | 12 | 317 | 285,529 | 90 |
6 | Retrospective | 12 | 222 | 315,498 | 88 |
7 | Retrospective | 12 | 106 | 144,754 | 68 |
8 | Retrospective | 9 | 194 | 112,553 | 55 |
*Objective of the sequencing run: protocol adaptation for WW samples (runs 1–4), prospective sequencing of fresh WW samples (run 4), retrospective sequencing of stored WW samples (runs 5 to 8).