TABLE 2.

List of powdery mildew genomes assessed for completeness through identification of Benchmarking Universal Single-Copy Orthologs (BUSCO) using BUSCO v.5.2.2 (Simão et al., 2015) and Leotiomycetes dataset Odb10.

Powdery mildew species	Isolate/specimen ID	Referencea	BUSCO resultsb
			Genome completeness (%)	CS	CD	F	M
Blumeria hordei (formerly B. graminis f. sp. hordei)	A6	Hacquard et al., 2013	84.7	2,728	11	193	302
	DH14	Frantzeskakis et al., 2018	94.7	3,042	21	74	97
	K1	Hacquard et al., 2013	94.3	3,023	25	77	109
	RACE1	Frantzeskakis et al., 2018	94.6	3,041	21	73	99
B. graminis f. sp. triticale	THUN-12	Müller et al., 2021	94.8	3,043	22	69	100
B. graminis f. sp. tritici	70	Wicker et al., 2013	94.0	3,035	7	85	107
	94202	Wicker et al., 2013	93.3	3,007	10	103	114
	96224	Wicker et al., 2013; Müller et al., 2019	94.5	3,038	18	70	108
	JIW2	Wicker et al., 2013	91.9	2,963	9	124	138
Erysiphe alphitoides	MS-42D	Dutech et al., 2020	95.4	2,322	762	60	90
E. necator	C	Jones et al., 2014	93.4	3,017	2	80	135
	e1-101	Jones et al., 2014	93.3	3,015	2	83	134
	Lodi	Jones et al., 2014	93.2	3,014	1	82	137
	Ranch9	Jones et al., 2014	93.0	3,009	2	84	139
E. neolycopersici (formerly Oidium neolycopersici)	UMSG2	Wu et al., 2018	93.0	3,000	6	90	138
E. pisi	Palampur-1	Unpublished JGI	92.4	2,939	47	107	141
	–	Unpublished, NCBI Acc. GCA_000208805.1	56.2	1,818	1	550	865
	–	Unpublished, NCBI Acc. GCA_000214055.1	63.8	2,064	1	464	705
Erysiphe pulchra	TENN-F-071826	Wadl et al., 2019	91.7	2,950	17	130	137
E. quercicola (formerly Oidium heveae)	HO-73	Liang et al., 2018	92.8	2,990	10	100	134
Golovinomyces cichoracearum	UCSC1	Wu et al., 2018	91.1	2,926	18	76	214
	UMSG3	Wu et al., 2018	91.3	2,932	20	76	206
G. magnicellulatus	FPH2017-1	Farinas et al., 2019	92.2	2,692	290	71	181
G. orontii	MGH1	Unpublished, JGI Genome MGH1 v4.0	89.9	648	2,261	103	222
Leveillula taurica	HNHM-MYC-006405	Kusch et al., 2020	82.4	2,661	3	83	487
Parauncinula polyspora	–	Frantzeskakis et al., 2019a	93.0	2,991	15	27	201
Phyllactinia moricola	HMJAU-PM91933	Kusch et al., 2022b	71.3	2,306	0	236	692
Pleochaeta shiraiana	HAL3440 F	Kusch et al., 2022b	76.6	2,465	12	93	664
Podosphaera cerasi	MH	Unpublished, NCBI Acc. GCA_018398735.1	91.9	2,962	9	87	176
P. leucotricha	PuE-3	Gañán et al., 2020	91.6	2,952	9	99	174
P. xanthii	2086	Polonio et al., 2021	90.9	2,899	41	67	227
	Wanju2017	Kim et al., 2021	91.6	2,811	151	66	206

Genomes of the isolates/specimens that were selected for the genome-scale phylogenetic analysis are indicated in bold.

^aWhere a reference for a genome assembly was not available, the genome accession number in National Centre for Biotechnology Information (NCBI) or Joint Genome Institute (JGI) is provided.

^bBenchmarking Universal Single-Copy Orthologs. CS, complete and single copy BUSCOs; CD, complete and duplicated BUSCOs; F, fragmented BUSCOs; M, missing BUSCOs.