Table 1. Performance of ML Models in Predicting Binding Free Energy of 162 Test Ligands to AChEa.
model | RMSE (kcal mol–1) | Pearson’s R | Spearman’sρ |
---|---|---|---|
LR | 2.155 ± 0.160 | 0.427 ± 0.070 | 0.522 ± 0.064 |
RF | 1.648 ± 0.126 | 0.694 ± 0.055 | 0.681 ± 0.055 |
XGBoost | 1.702 ± 0.154 | 0.669 ± 0.059 | 0.658 ± 0.061 |
GraphConv | 1.580 ± 0.137 | 0.721 ± 0.050 | 0.692 ± 0.054 |
The error bars were estimated using bootstrapping.