Figure 3.
Spatial dissection of orchestrated immune composition and responses to SIV infection
(A) Bar plots of proportions of each cell type per FOV across the 20 FOVs acquired in this study.
(B) Bar plots of proportions of each cell type aggregated on a per animal basis.
(C) Bar plots representing the proportions of each cell type aggregated by infection status.
(D) Ranked log2-fold enrichment (infected over uninfected controls) for each cell type, ranked from the most enriched (left) to most depleted (right) in SIV-infected animals relative to uninfected controls.
(E) Ranked bar plots showing the percent infiltration of each cell type indicated across the 20 FOVs with bars colored by infection status. The yellow box indicates the acutely infected animal.
See also Figure S3.