Table 3.
List of RAR and RXR binding sites in the promoter of genes classified as being transcriptionally dysregulated in cancer and functionally associated with HOXA9.
| Transcription Factor |
MLLT3 | MEIS1 | HOXA10 | PBX1 | PBX3 | KMT2A | EIF4E | NUP98 | SMAD4 | PBX2 | NUP115 | NUP85 | NUP133 | NUP107 | EIF4EBP3 | EIF4A1 | RBBP5 | AFF4 | EP300 | SMAD2 |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| RXRA | 11 | 15 | 21 | 4 | 8 | 13 | 8 | 15 | 7 | 18 | 11 | 11 | 8 | 5 | 10 | 12 | 9 | 14 | 15 | 13 |
| RARB | 2 | 4 | 7 | 1 | 1 | 6 | 1 | 4 | 2 | 4 | 4 | 5 | 4 | 2 | 4 | 3 | 1 | 4 | 4 | 3 |
| RARB: RXRA |
1 | 2 | 4 | 3 | 1 | 1 | 2 | 1 | 4 | 1 | 2 | 3 | 1 | 2 | 2 | |||||
| PXR-1/ RXRA |
3 | 2 | 3 | 2 | 3 | 2 | 1 | 3 | 1 | 3 | 2 | 3 | 4 | 1 | 3 | 3 | 1 | 3 | ||
| PPARA/ RXRA |
2 | 1 | 1 | 3 | 1 | 4 | 4 | 2 | 1 | 2 | 1 | 1 | 4 | 2 | 3 | 2 | ||||
| RARA1 | 1 | 2 | ||||||||||||||||||
| TOTAL | 17 | 24 | 35 | 8 | 13 | 25 | 14 | 29 | 15 | 31 | 18 | 21 | 15 | 13 | 25 | 16 | 16 | 26 | 20 | 23 |