Table 4.
Statistics of differentially expressed genes.
| Groups | Differentially Expressed Genes | Upregulated Genes | Downregulated Genes |
|---|---|---|---|
| Y9_CK1 vs. Y9_NA1 | 88 | 34 | 54 |
| Y9_CK2 vs. Y9_NA2 | 1898 | 613 | 1285 |
| Y9_CK3 vs. Y9_NA3 | 4316 | 2860 | 1456 |
| Y1_CK1 vs. Y1_NA1 | 77 | 58 | 19 |
| Y1_CK2 vs. Y1_NA2 | 425 | 97 | 328 |
| Y1_CK3 vs. Y1_NA3 | 3051 | 1447 | 1604 |
| Y1_CK1 vs. Y9_CK1 | 1182 | 718 | 464 |
| Y1_CK2 vs. Y9_CK2 | 2442 | 954 | 1488 |
| Y1_CK3 vs. Y9_CK3 | 1968 | 568 | 1400 |
| Y1_NA1 vs. Y9_NA1 | 910 | 548 | 362 |
| Y1_NA2 vs. Y9_NA2 | 1406 | 628 | 778 |
| Y1_NA3 vs. Y9_NA3 | 1338 | 477 | 861 |
Note: Y9, Y1 represent Yumi 9 and Yumi 1, respectively. CK represents control, NA represents salt stress (250 mM NaCl). 1, 2, 3 represent the three periods. Y9_CK1 vs. Y9_NA1 refers to the Y9 genes found to be differentially expressed in NA treatment compared with CK at the first sampling period. The remaining labels show similar comparisons but for different treatments and periods as indicated.