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. 2000 Sep;66(9):3974–3980. doi: 10.1128/aem.66.9.3974-3980.2000

TABLE 2.

Summary of primers

Primer Sequence (5′-3′)a Location (nucleotides) Comment
WG-1 CCYTCRCGRCCGCCCCA 1913–1897b L. lactis B-4449 xylA PCR
NH-1 ACNAARACNAARAAYATGTTY 1378–1399b L. lactis B-4449 xylA PCR
5 TGATGCCAATCTTGG 2220–2234b L. lactis B-4449 xylA inverse PCR
7 TCTGGTAGGTCTTCTCCTA ∼1.6 kg upstream of xylA L. lactis B-4449 xylA inverse PCR
BFX CGGGATCCATGTTCATTCTCTCCTAATCAC 1171–1192c xylA PCR and Northern primer
HRX CCCAAGCTTGGTTCCTAAGT 2702–2691c xylA PCR and Nothern primer
BFX-rev GTGATTAGGAGAGAATGAACAT 1192–1171c xylR-xylB inverse PCR
HRX-rev TTAGGAATTGACTTAGGAACC 2681–2702c xylR-xylB inverse PCR
210ip820-rev TGAGTAACAAGCACCCGGAACC 3544–3523c xylB inverse PCR
R210xb-rev TAGAAGCGGTCACTAAAGC 4011–4029c xylB inverse PCR
Ip412-rev AGAAATTGCTGGATAAACTGG 2964–2945c xylB inverse PCR
M13-40 GTTTTCCCAGTCACGAC NAd Vector sequencing primer
M13rev(ht) GCTTTAGTGACCGCTTCTA NA Vector sequencing primer
a

R = A or G; Y = C or T; H = A or C or T; N = any nucleotide. 

b

Nubmering corresponds to L. lactis B-4449 xyl-xyn operon (including sequence upstream of xylR); GenBank accession no. AF092042

c

Numbering corresponds to L. lactis IO-1 xyl-xyn operon (including upstream sequence); GenBank accession no. AF092041

d

NA, not available.