Table 2.
Assembly quality data of the investigated Pakistani strains, which were sequenced using the Illumina short-read technique.
| Strain | Coverage | Bases | Contigs | GC (%) | L50 | N50 | GF * (%) | CDS |
|---|---|---|---|---|---|---|---|---|
| Pak2018H3 | 100 | 5,526,644 | 295 | 68.68 | 44 | 43,202 | 92.86 | 4614 |
| Pak2018M4 | 118 | 5,526,233 | 269 | 68.68 | 41 | 46,366 | 92.95 | 4615 |
| Pak2019H6 | 79 | 5,526,261 | 262 | 68.69 | 40 | 46,511 | 92.98 | 4631 |
| Pak2017H7 | 86 | 5,528,440 | 272 | 68.69 | 42 | 46,377 | 92.97 | 4623 |
| Pak2020M8 | 98 | 5,593,509 | 284 | 68.22 | 41 | 46,937 | 92.64 | 4639 |
| Pak2019H9 | 68 | 5,305,987 | 266 | 68.60 | 40 | 44,187 | 89.23 | 4442 |
| Pak2018H10 | 75 | 5,536,192 | 307 | 68.65 | 45 | 43,210 | 92.91 | 4630 |
| Pak2020M11 | 127 | 5,530,694 | 379 | 68.59 | 61 | 30,209 | 92.59 | 4667 |
| PRL1 | 121 | 5,523,415 | 294 | 68.66 | 43 | 43,660 | 92.95 | 4610 |
| PRL2 | 112 | 5,512,370 | 302 | 68.67 | 43 | 42,887 | 92.54 | 4595 |
| PRL3 | 116 | 5,599,466 | 279 | 68.69 | 40 | 46,978 | 92.50 | 4680 |
| PRL4 | 120 | 5,517,077 | 287 | 68.68 | 41 | 43,747 | 92.54 | 4605 |
| PRL7 | 114 | 5,282,618 | 281 | 68.58 | 41 | 43,782 | 88.62 | 4432 |
| PRL11 | 124 | 5,509,016 | 290 | 68.68 | 41 | 45,145 | 92.56 | 4600 |
| PRL34 | 90 | 5,559,549 | 287 | 68.73 | 42 | 45,246 | 92.51 | 4623 |
| PRL41 | 82 | 5,589,007 | 272 | 68.71 | 39 | 46,976 | 92.87 | 4666 |
| PRL42 | 78 | 5,575,591 | 270 | 68.70 | 38 | 48,213 | 93.81 | 4652 |
| PRL43 | 82 | 5,579,744 | 271 | 68.69 | 41 | 46,808 | 93.82 | 4658 |
| PRL44 | 171 | 5,527,185 | 294 | 68.69 | 42 | 43,055 | 92.95 | 4613 |
* Genome fraction covering reference genome ATCC 23344.