Diagram of spore formation and gene regulation network for sporulation in B. subtilis. (A) Diagram of spore formation. Shown are different stages of sporulation in B. subtilis from stage 0 to stage VII. Stage 0: vegetative cell; stage I: genome replication; stage II: asymmetric division (stage II is shown in two different substages, one with formation of asymmetric septum (IIa) and the other with the completion of asymmetric division (IIb)); stage III: forespore engulfment; stage IV: spore cortex formation; stage V: spore coat formation; stage VI: mother cell lysis; stage VII: phase-bright free spore. (B) Signal transduction and phosphorelay for activation of sporulation in B. subtilis. The three membrane-associated sporulation kinases (KinB, KinC, and KinD) and the cytoplasmic histidine kinase KinA act together in activating sporulation by sensing a diverse set of environmental and cellular signals. KinD has an extracellular CACHE domain involved in direct sensing of plant root-released l-malic acid [16]. KinE is proposed to act as a phosphatase rather than a kinase under normal sporulation conditions [17]. Spo0F (0F), Spo0B (0B), and Spo0A (0A) constitute the phosphorelay. High levels of phosphorylated Spo0A (0A~P) directly and indirectly activate hundreds of genes involved in sporulation, some of which are through mother cell or forespore-specific sigma factors that function in a cascade. The phosphatase Spo0E negatively regulates Spo0A~P and the Rap family phosphatases negatively regulate Spo0F~P. (C) Increased Spo0A~P levels lead to activation of the first sporulation sigma factor F (σF) in the forespore (Fs), followed by sequential activation of several other alternative sigma factors (σE, σG, and σK) in either the mother cell (Mc) or the forespore compartment [12].