Table 2.
Databases used by PIMGAVir and Vir-MinION.
| Database Name | Version | Build Up Date |
|---|---|---|
| diamond/refseq_protein_nonredund | Refseq protein non redundant genomes Database format version = 3 | 6–14 May 2022 |
| krakendb/SILVA_138.1_SSURef_NR99_tax_silva | Silva DB v. 138.1 | 17 May 2021 |
| krakenviral/database.kraken | Kraken Viral DB v2.0.8 | 17 May 2021 |
| NCBI-RefSeq/viralseq_2021-12-14_14-45-53 | Refseq viruses’ representative genomes. BLASTDB Version: 5 | 14 December 2021 |
| SILVA/ssr138, slr138 | Ribosomal DB for SSR138 and SLR138 | 27 August 2020 |