Fig 3. Relative abundance of genes based on mobile genetic element annotation across treatments in each time-point.

Stacked bar plot demonstrating the relative abundance distribution of classified plasmid replicons (A). Stacked bar plot illustrating the relative abundance distribution of aligned integron integrase genes (B). Stacked bar plot displaying the relative abundance distribution of sorted insertion sequences (C). D2 refers to 2 days of age, before probiotic treatment.