Gene (Drosophila melanogaster) |
PRPS |
Genbank |
P0A717 |
|
Strain, strain background (Escherichia coli) |
Transetta (DE3) |
TransGen Biotech |
|
|
Recombinant DNA reagent |
pRSFDuet-6His |
In house |
|
|
Commercial assay or kit |
BCA Protein Concentration Determination Kit (Enhanced) |
Beyotime |
P0010 |
|
Chemical compound, drug |
Benzamidine hydrochloride |
Sigma-Aldrich |
434760–5 G |
|
Chemical compound, drug |
Pepstatin A |
Sigma-Aldrich |
P5318-25MG |
|
Chemical compound, drug |
Leupeptin hydrochloride microbial |
Sigma/Aldrich |
L9783-100MG |
|
Chemical compound, drug |
PMSF |
MDBio |
P006-5g |
|
Chemical compound, drug |
Ni-NTA Agarose |
QIAGEN |
30,250 |
|
Chemical compound, drug |
Orotic acid |
Adamas |
01102798 (74736A) |
|
Chemical compound, drug |
ATP |
Takara |
4,041 |
|
Chemical compound, drug |
D-Ribose 5 phosphate disodium salt |
BIOSYNTH CARBOSYNTH |
R-5600 |
|
Chemical compound, drug |
5-phospho-D-ribose 1-diphosphate penta-sodium salt |
Sigma |
P8296-25 mg |
|
Chemical compound, drug |
Adenosine 5'-monophosphate |
solarbio |
A9860-1 |
|
Chemical compound, drug |
Adenosine 5'-diphosphate sodium salt |
Sigma |
A2754-100MG |
|
Other |
Nitinol mesh |
Zhenjiang Lehua Electronic Technology |
M024-Au300-R12/13 |
Cryo-EM grid preparation |
Other |
Holey Carbon Film |
Quantifoil |
R1.2/1.3, 300 Mesh, Cu |
Cryo-EM grid preparation |
Other |
400 mesh reinforced carbon support film |
EMCN |
BZ31024a |
Negative staining |
Software, algorithm |
UCSF Chimera |
https://doi.org/10.1002/jcc.20084
|
|
https://www.cgl.ucsf.edu/chimera
|
Software, algorithm |
UCSF Chimera X |
https://doi.org/10.1002/pro.3235
|
|
https://www.cgl.ucsf.edu/chimerax/
|
Software, algorithm |
Relion |
https://doi.org/10.7554/eLife.42166
|
|
https://relion.readthedocs.io/en/latest/index.html# |
Software, algorithm |
Coot |
https://doi.org/10.1107/S0907444910007493
|
|
https://www2.mrc-lmb.cam.ac.uk/personal/pemsley/coot/
|
Software, algorithm |
Phenix |
https://doi.org/10.1107/S2059798318006551
|
|
https://phenix-online.org/
|