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. 2022 Jun 17;20:3140–3150. doi: 10.1016/j.csbj.2022.06.038

Fig. 5.

Fig. 5

Molecular dynamics simulations of BtMan2A non-catalytic binding domain and galactomannan interaction at pH 5 and pH 7 using GROMACS and the CHARMM 37 force field; (A) RMSD analysis of the protein backbone of BtMan2A structures at both pH 5 and pH 7, (B) RMSD analysis of galactomannan bound to BtMan2A structures at both pH 5 and pH 7, and (C) RMSF backbone analysis of the protein residues of BtMan2A structures at both pH 5 and pH 7.