Table 1.
Summary of the taxonomic assignments of the reads for each of the two classifiers used (Kraken2 and Kaiju).
| Kraken2 | Kaiju | |
|---|---|---|
| Number of reads | Number of reads | |
| Eukaryota | ||
| Homo sapiens | 134,702 | 63,192 |
| Other | 0 | 13,730 |
| Total | 134,702 (92.86%) | 76,922 (64.02%) |
| Bacteria | ||
| Proteobacteria | 1384 | 24,088 |
| Terrabacteria group | 23 | 7555 |
| Chlamydiae | 0 | 1077 |
| Other | 0 | 3382 |
| Total | 1407 (0.97%) | 36,102 (30.02%) |
| Double-stranded DNA virus, no RNA stage | ||
| Family Poxviridae | 2168 | 2195 |
| Other | – | 127 |
| Total | 2198 (1.51%) | 2322 (1.93%) |
| Unassigned | – | 4841 (4.03%) |
| Bacterial metagenomes | 6761 (4.66%) | – |
| Total number of reads assigned to a taxon | 145,068 (100%) | 120,187 (100%) |